Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8964 | 27115;27116;27117 | chr2:178713244;178713243;178713242 | chr2:179577971;179577970;179577969 |
N2AB | 8647 | 26164;26165;26166 | chr2:178713244;178713243;178713242 | chr2:179577971;179577970;179577969 |
N2A | 7720 | 23383;23384;23385 | chr2:178713244;178713243;178713242 | chr2:179577971;179577970;179577969 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.001 | N | 0.139 | 0.082 | 0.0297737177859 | gnomAD-4.0.0 | 7.53702E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.90827E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1375 | likely_benign | 0.1437 | benign | -0.319 | Destabilizing | 0.129 | N | 0.309 | neutral | None | None | None | None | N |
N/C | 0.1801 | likely_benign | 0.201 | benign | 0.208 | Stabilizing | 0.983 | D | 0.311 | neutral | None | None | None | None | N |
N/D | 0.1058 | likely_benign | 0.1152 | benign | 0.277 | Stabilizing | 0.001 | N | 0.145 | neutral | N | 0.457252277 | None | None | N |
N/E | 0.1483 | likely_benign | 0.1486 | benign | 0.263 | Stabilizing | 0.004 | N | 0.117 | neutral | None | None | None | None | N |
N/F | 0.2866 | likely_benign | 0.3182 | benign | -0.684 | Destabilizing | 0.557 | D | 0.383 | neutral | None | None | None | None | N |
N/G | 0.2157 | likely_benign | 0.2252 | benign | -0.503 | Destabilizing | 0.129 | N | 0.193 | neutral | None | None | None | None | N |
N/H | 0.0673 | likely_benign | 0.0649 | benign | -0.444 | Destabilizing | 0.655 | D | 0.281 | neutral | N | 0.473125806 | None | None | N |
N/I | 0.1068 | likely_benign | 0.1154 | benign | 0.076 | Stabilizing | 0.655 | D | 0.401 | neutral | N | 0.463967605 | None | None | N |
N/K | 0.0938 | likely_benign | 0.0987 | benign | 0.095 | Stabilizing | 0.001 | N | 0.139 | neutral | N | 0.376788551 | None | None | N |
N/L | 0.144 | likely_benign | 0.1455 | benign | 0.076 | Stabilizing | 0.264 | N | 0.375 | neutral | None | None | None | None | N |
N/M | 0.1731 | likely_benign | 0.1773 | benign | 0.175 | Stabilizing | 0.836 | D | 0.331 | neutral | None | None | None | None | N |
N/P | 0.7414 | likely_pathogenic | 0.7572 | pathogenic | -0.028 | Destabilizing | 0.593 | D | 0.409 | neutral | None | None | None | None | N |
N/Q | 0.1295 | likely_benign | 0.1236 | benign | -0.341 | Destabilizing | 0.004 | N | 0.138 | neutral | None | None | None | None | N |
N/R | 0.1061 | likely_benign | 0.1059 | benign | 0.123 | Stabilizing | 0.264 | N | 0.195 | neutral | None | None | None | None | N |
N/S | 0.0735 | likely_benign | 0.0743 | benign | -0.208 | Destabilizing | 0.007 | N | 0.14 | neutral | N | 0.424136994 | None | None | N |
N/T | 0.0796 | likely_benign | 0.0804 | benign | -0.07 | Destabilizing | 0.101 | N | 0.202 | neutral | N | 0.434279416 | None | None | N |
N/V | 0.1173 | likely_benign | 0.1221 | benign | -0.028 | Destabilizing | 0.418 | N | 0.403 | neutral | None | None | None | None | N |
N/W | 0.4877 | ambiguous | 0.499 | ambiguous | -0.702 | Destabilizing | 0.951 | D | 0.319 | neutral | None | None | None | None | N |
N/Y | 0.1014 | likely_benign | 0.1089 | benign | -0.414 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.490711489 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.