Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8965 | 27118;27119;27120 | chr2:178713241;178713240;178713239 | chr2:179577968;179577967;179577966 |
N2AB | 8648 | 26167;26168;26169 | chr2:178713241;178713240;178713239 | chr2:179577968;179577967;179577966 |
N2A | 7721 | 23386;23387;23388 | chr2:178713241;178713240;178713239 | chr2:179577968;179577967;179577966 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs200325324 | 0.467 | 0.805 | N | 0.543 | 0.199 | None | gnomAD-2.1.1 | 7.17E-05 | None | None | None | None | N | None | 1.2444E-04 | 0 | None | 0 | 0 | None | 1.31631E-04 | None | 1.60179E-04 | 6.27E-05 | 1.41044E-04 |
E/K | rs200325324 | 0.467 | 0.805 | N | 0.543 | 0.199 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 2.07555E-04 | 0 |
E/K | rs200325324 | 0.467 | 0.805 | N | 0.543 | 0.199 | None | gnomAD-4.0.0 | 4.83579E-05 | None | None | None | None | N | None | 2.67137E-05 | 0 | None | 0 | 0 | None | 2.50063E-04 | 0 | 3.5609E-05 | 1.75956E-04 | 3.2039E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1425 | likely_benign | 0.1687 | benign | -0.536 | Destabilizing | 0.025 | N | 0.328 | neutral | N | 0.497426818 | None | None | N |
E/C | 0.8153 | likely_pathogenic | 0.8832 | pathogenic | -0.283 | Destabilizing | 0.997 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/D | 0.2418 | likely_benign | 0.2849 | benign | -0.429 | Destabilizing | 0.892 | D | 0.515 | neutral | N | 0.506256945 | None | None | N |
E/F | 0.721 | likely_pathogenic | 0.8091 | pathogenic | -0.104 | Destabilizing | 0.987 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/G | 0.2012 | likely_benign | 0.2609 | benign | -0.772 | Destabilizing | 0.805 | D | 0.555 | neutral | D | 0.523960058 | None | None | N |
E/H | 0.4157 | ambiguous | 0.4809 | ambiguous | 0.24 | Stabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
E/I | 0.2802 | likely_benign | 0.3611 | ambiguous | 0.072 | Stabilizing | 0.975 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.0763 | likely_benign | 0.0888 | benign | 0.279 | Stabilizing | 0.805 | D | 0.543 | neutral | N | 0.479955778 | None | None | N |
E/L | 0.3149 | likely_benign | 0.3933 | ambiguous | 0.072 | Stabilizing | 0.95 | D | 0.585 | neutral | None | None | None | None | N |
E/M | 0.3409 | ambiguous | 0.4113 | ambiguous | 0.085 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/N | 0.3205 | likely_benign | 0.4181 | ambiguous | -0.331 | Destabilizing | 0.987 | D | 0.534 | neutral | None | None | None | None | N |
E/P | 0.3102 | likely_benign | 0.369 | ambiguous | -0.111 | Destabilizing | 0.987 | D | 0.628 | neutral | None | None | None | None | N |
E/Q | 0.1094 | likely_benign | 0.1186 | benign | -0.249 | Destabilizing | 0.426 | N | 0.316 | neutral | N | 0.481630646 | None | None | N |
E/R | 0.1459 | likely_benign | 0.1625 | benign | 0.615 | Stabilizing | 0.975 | D | 0.529 | neutral | None | None | None | None | N |
E/S | 0.2392 | likely_benign | 0.303 | benign | -0.464 | Destabilizing | 0.845 | D | 0.525 | neutral | None | None | None | None | N |
E/T | 0.2185 | likely_benign | 0.2821 | benign | -0.254 | Destabilizing | 0.916 | D | 0.549 | neutral | None | None | None | None | N |
E/V | 0.1772 | likely_benign | 0.2223 | benign | -0.111 | Destabilizing | 0.935 | D | 0.535 | neutral | N | 0.471723084 | None | None | N |
E/W | 0.8734 | likely_pathogenic | 0.9244 | pathogenic | 0.167 | Stabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.5889 | likely_pathogenic | 0.6906 | pathogenic | 0.173 | Stabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.