Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8966 | 27121;27122;27123 | chr2:178713238;178713237;178713236 | chr2:179577965;179577964;179577963 |
N2AB | 8649 | 26170;26171;26172 | chr2:178713238;178713237;178713236 | chr2:179577965;179577964;179577963 |
N2A | 7722 | 23389;23390;23391 | chr2:178713238;178713237;178713236 | chr2:179577965;179577964;179577963 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.124 | D | 0.591 | 0.445 | 0.688520839138 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.222 | 0.103 | 0.450733807028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.867 | likely_pathogenic | 0.9137 | pathogenic | -1.876 | Destabilizing | 0.157 | N | 0.552 | neutral | None | None | None | None | N |
I/C | 0.9345 | likely_pathogenic | 0.9626 | pathogenic | -1.029 | Destabilizing | 0.909 | D | 0.637 | neutral | None | None | None | None | N |
I/D | 0.9823 | likely_pathogenic | 0.9917 | pathogenic | -1.865 | Destabilizing | 0.726 | D | 0.745 | deleterious | None | None | None | None | N |
I/E | 0.9672 | likely_pathogenic | 0.9825 | pathogenic | -1.62 | Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/F | 0.3603 | ambiguous | 0.5031 | ambiguous | -1.058 | Destabilizing | 0.497 | N | 0.549 | neutral | N | 0.506246709 | None | None | N |
I/G | 0.9643 | likely_pathogenic | 0.9799 | pathogenic | -2.419 | Highly Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/H | 0.9475 | likely_pathogenic | 0.9752 | pathogenic | -1.918 | Destabilizing | 0.968 | D | 0.749 | deleterious | None | None | None | None | N |
I/K | 0.8995 | likely_pathogenic | 0.9517 | pathogenic | -1.114 | Destabilizing | 0.726 | D | 0.708 | prob.delet. | None | None | None | None | N |
I/L | 0.1464 | likely_benign | 0.1875 | benign | -0.317 | Destabilizing | None | N | 0.191 | neutral | N | 0.418229742 | None | None | N |
I/M | 0.2073 | likely_benign | 0.2798 | benign | -0.318 | Destabilizing | 0.497 | N | 0.565 | neutral | N | 0.492332736 | None | None | N |
I/N | 0.8694 | likely_pathogenic | 0.9318 | pathogenic | -1.48 | Destabilizing | 0.859 | D | 0.753 | deleterious | D | 0.53523997 | None | None | N |
I/P | 0.9704 | likely_pathogenic | 0.9822 | pathogenic | -0.816 | Destabilizing | 0.726 | D | 0.753 | deleterious | None | None | None | None | N |
I/Q | 0.9386 | likely_pathogenic | 0.9676 | pathogenic | -1.281 | Destabilizing | 0.89 | D | 0.749 | deleterious | None | None | None | None | N |
I/R | 0.8753 | likely_pathogenic | 0.9365 | pathogenic | -1.086 | Destabilizing | 0.726 | D | 0.751 | deleterious | None | None | None | None | N |
I/S | 0.9155 | likely_pathogenic | 0.9526 | pathogenic | -2.191 | Highly Destabilizing | 0.497 | N | 0.635 | neutral | N | 0.510045371 | None | None | N |
I/T | 0.8695 | likely_pathogenic | 0.926 | pathogenic | -1.786 | Destabilizing | 0.124 | N | 0.591 | neutral | D | 0.525196657 | None | None | N |
I/V | 0.152 | likely_benign | 0.1728 | benign | -0.816 | Destabilizing | 0.001 | N | 0.222 | neutral | N | 0.494463871 | None | None | N |
I/W | 0.9442 | likely_pathogenic | 0.9731 | pathogenic | -1.414 | Destabilizing | 0.968 | D | 0.741 | deleterious | None | None | None | None | N |
I/Y | 0.8114 | likely_pathogenic | 0.8855 | pathogenic | -1.03 | Destabilizing | 0.726 | D | 0.678 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.