Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8970 | 27133;27134;27135 | chr2:178713226;178713225;178713224 | chr2:179577953;179577952;179577951 |
N2AB | 8653 | 26182;26183;26184 | chr2:178713226;178713225;178713224 | chr2:179577953;179577952;179577951 |
N2A | 7726 | 23401;23402;23403 | chr2:178713226;178713225;178713224 | chr2:179577953;179577952;179577951 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs879143084 | None | 0.086 | N | 0.154 | 0.068 | 0.0954503805726 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88324E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1504 | likely_benign | 0.158 | benign | -0.129 | Destabilizing | 0.003 | N | 0.095 | neutral | None | None | None | None | N |
R/C | 0.123 | likely_benign | 0.1442 | benign | -0.431 | Destabilizing | 0.968 | D | 0.235 | neutral | None | None | None | None | N |
R/D | 0.2162 | likely_benign | 0.208 | benign | -0.455 | Destabilizing | 0.001 | N | 0.096 | neutral | None | None | None | None | N |
R/E | 0.1323 | likely_benign | 0.1409 | benign | -0.44 | Destabilizing | 0.002 | N | 0.093 | neutral | None | None | None | None | N |
R/F | 0.2925 | likely_benign | 0.3017 | benign | -0.499 | Destabilizing | 0.002 | N | 0.186 | neutral | None | None | None | None | N |
R/G | 0.0912 | likely_benign | 0.099 | benign | -0.208 | Destabilizing | None | N | 0.091 | neutral | N | 0.43242475 | None | None | N |
R/H | 0.0846 | likely_benign | 0.0836 | benign | -0.67 | Destabilizing | 0.83 | D | 0.23 | neutral | None | None | None | None | N |
R/I | 0.1135 | likely_benign | 0.1214 | benign | 0.034 | Stabilizing | 0.582 | D | 0.381 | neutral | None | None | None | None | N |
R/K | 0.0751 | likely_benign | 0.0794 | benign | -0.418 | Destabilizing | 0.086 | N | 0.154 | neutral | N | 0.46782819 | None | None | N |
R/L | 0.1247 | likely_benign | 0.1267 | benign | 0.034 | Stabilizing | 0.223 | N | 0.221 | neutral | None | None | None | None | N |
R/M | 0.1279 | likely_benign | 0.142 | benign | -0.293 | Destabilizing | 0.958 | D | 0.248 | neutral | N | 0.465731746 | None | None | N |
R/N | 0.2082 | likely_benign | 0.2063 | benign | -0.335 | Destabilizing | 0.223 | N | 0.245 | neutral | None | None | None | None | N |
R/P | 0.1484 | likely_benign | 0.1349 | benign | -0.007 | Destabilizing | 0.002 | N | 0.127 | neutral | None | None | None | None | N |
R/Q | 0.0694 | likely_benign | 0.0711 | benign | -0.343 | Destabilizing | 0.223 | N | 0.25 | neutral | None | None | None | None | N |
R/S | 0.1609 | likely_benign | 0.164 | benign | -0.442 | Destabilizing | 0.086 | N | 0.235 | neutral | N | 0.400352404 | None | None | N |
R/T | 0.1066 | likely_benign | 0.1154 | benign | -0.355 | Destabilizing | 0.302 | N | 0.243 | neutral | N | 0.466462753 | None | None | N |
R/V | 0.1611 | likely_benign | 0.1677 | benign | -0.007 | Destabilizing | 0.365 | N | 0.233 | neutral | None | None | None | None | N |
R/W | 0.1125 | likely_benign | 0.1198 | benign | -0.734 | Destabilizing | 0.882 | D | 0.235 | neutral | N | 0.465731746 | None | None | N |
R/Y | 0.2064 | likely_benign | 0.2193 | benign | -0.38 | Destabilizing | 0.008 | N | 0.132 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.