Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8971 | 27136;27137;27138 | chr2:178713223;178713222;178713221 | chr2:179577950;179577949;179577948 |
N2AB | 8654 | 26185;26186;26187 | chr2:178713223;178713222;178713221 | chr2:179577950;179577949;179577948 |
N2A | 7727 | 23404;23405;23406 | chr2:178713223;178713222;178713221 | chr2:179577950;179577949;179577948 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs373877046 | 0.218 | 0.92 | N | 0.364 | 0.257 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/E | rs373877046 | 0.218 | 0.92 | N | 0.364 | 0.257 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs373877046 | 0.218 | 0.92 | N | 0.364 | 0.257 | None | gnomAD-4.0.0 | 1.98335E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71257E-05 | 0 | 0 |
K/N | None | None | 0.061 | N | 0.126 | 0.123 | 0.0611884634855 | gnomAD-4.0.0 | 2.73724E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.824 | likely_pathogenic | 0.86 | pathogenic | -0.601 | Destabilizing | 0.939 | D | 0.321 | neutral | None | None | None | None | N |
K/C | 0.9414 | likely_pathogenic | 0.955 | pathogenic | -0.589 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
K/D | 0.862 | likely_pathogenic | 0.8878 | pathogenic | 0.078 | Stabilizing | 0.884 | D | 0.323 | neutral | None | None | None | None | N |
K/E | 0.5852 | likely_pathogenic | 0.6571 | pathogenic | 0.182 | Stabilizing | 0.92 | D | 0.364 | neutral | N | 0.509485598 | None | None | N |
K/F | 0.9453 | likely_pathogenic | 0.9569 | pathogenic | -0.427 | Destabilizing | 0.997 | D | 0.529 | neutral | None | None | None | None | N |
K/G | 0.8608 | likely_pathogenic | 0.8755 | pathogenic | -0.935 | Destabilizing | 0.939 | D | 0.342 | neutral | None | None | None | None | N |
K/H | 0.6011 | likely_pathogenic | 0.639 | pathogenic | -1.202 | Destabilizing | 0.991 | D | 0.43 | neutral | None | None | None | None | N |
K/I | 0.6807 | likely_pathogenic | 0.7513 | pathogenic | 0.251 | Stabilizing | 0.996 | D | 0.513 | neutral | N | 0.458707535 | None | None | N |
K/L | 0.7072 | likely_pathogenic | 0.7469 | pathogenic | 0.251 | Stabilizing | 0.939 | D | 0.399 | neutral | None | None | None | None | N |
K/M | 0.5617 | ambiguous | 0.6447 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | N |
K/N | 0.7184 | likely_pathogenic | 0.7502 | pathogenic | -0.336 | Destabilizing | 0.061 | N | 0.126 | neutral | N | 0.47933605 | None | None | N |
K/P | 0.9235 | likely_pathogenic | 0.9265 | pathogenic | -0.003 | Destabilizing | 0.997 | D | 0.422 | neutral | None | None | None | None | N |
K/Q | 0.4053 | ambiguous | 0.4844 | ambiguous | -0.381 | Destabilizing | 0.92 | D | 0.427 | neutral | N | 0.507946803 | None | None | N |
K/R | 0.1283 | likely_benign | 0.1514 | benign | -0.401 | Destabilizing | 0.035 | N | 0.231 | neutral | N | 0.364967607 | None | None | N |
K/S | 0.8486 | likely_pathogenic | 0.8652 | pathogenic | -1.007 | Destabilizing | 0.939 | D | 0.318 | neutral | None | None | None | None | N |
K/T | 0.5603 | ambiguous | 0.6269 | pathogenic | -0.691 | Destabilizing | 0.92 | D | 0.333 | neutral | N | 0.497095091 | None | None | N |
K/V | 0.7107 | likely_pathogenic | 0.7754 | pathogenic | -0.003 | Destabilizing | 0.991 | D | 0.409 | neutral | None | None | None | None | N |
K/W | 0.9249 | likely_pathogenic | 0.9388 | pathogenic | -0.309 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
K/Y | 0.8436 | likely_pathogenic | 0.8712 | pathogenic | -0.012 | Destabilizing | 0.997 | D | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.