Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8974 | 27145;27146;27147 | chr2:178713214;178713213;178713212 | chr2:179577941;179577940;179577939 |
N2AB | 8657 | 26194;26195;26196 | chr2:178713214;178713213;178713212 | chr2:179577941;179577940;179577939 |
N2A | 7730 | 23413;23414;23415 | chr2:178713214;178713213;178713212 | chr2:179577941;179577940;179577939 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.093 | 0.121 | 0.136095386433 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77469E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1176692583 | 0.067 | None | N | 0.245 | 0.118 | 0.260249123532 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1176692583 | 0.067 | None | N | 0.245 | 0.118 | 0.260249123532 | gnomAD-4.0.0 | 2.03005E-06 | None | None | None | None | I | None | 3.49614E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0722 | likely_benign | 0.0706 | benign | -1.307 | Destabilizing | None | N | 0.093 | neutral | N | 0.510507971 | None | None | I |
T/C | 0.3439 | ambiguous | 0.3782 | ambiguous | -0.831 | Destabilizing | 0.356 | N | 0.541 | neutral | None | None | None | None | I |
T/D | 0.4338 | ambiguous | 0.4896 | ambiguous | -0.439 | Destabilizing | 0.072 | N | 0.543 | neutral | None | None | None | None | I |
T/E | 0.3149 | likely_benign | 0.3494 | ambiguous | -0.392 | Destabilizing | 0.072 | N | 0.487 | neutral | None | None | None | None | I |
T/F | 0.2002 | likely_benign | 0.2312 | benign | -1.424 | Destabilizing | 0.214 | N | 0.591 | neutral | None | None | None | None | I |
T/G | 0.249 | likely_benign | 0.2655 | benign | -1.589 | Destabilizing | 0.016 | N | 0.447 | neutral | None | None | None | None | I |
T/H | 0.238 | likely_benign | 0.2717 | benign | -1.843 | Destabilizing | 0.628 | D | 0.533 | neutral | None | None | None | None | I |
T/I | 0.1379 | likely_benign | 0.1473 | benign | -0.625 | Destabilizing | None | N | 0.245 | neutral | N | 0.403665721 | None | None | I |
T/K | 0.1868 | likely_benign | 0.2292 | benign | -0.693 | Destabilizing | 0.072 | N | 0.489 | neutral | None | None | None | None | I |
T/L | 0.0846 | likely_benign | 0.0869 | benign | -0.625 | Destabilizing | 0.002 | N | 0.366 | neutral | None | None | None | None | I |
T/M | 0.0695 | likely_benign | 0.0705 | benign | -0.252 | Destabilizing | 0.002 | N | 0.354 | neutral | None | None | None | None | I |
T/N | 0.1356 | likely_benign | 0.1609 | benign | -0.789 | Destabilizing | 0.055 | N | 0.465 | neutral | N | 0.486960231 | None | None | I |
T/P | 0.1447 | likely_benign | 0.1942 | benign | -0.822 | Destabilizing | None | N | 0.377 | neutral | N | 0.505968943 | None | None | I |
T/Q | 0.2211 | likely_benign | 0.2501 | benign | -0.925 | Destabilizing | 0.356 | N | 0.592 | neutral | None | None | None | None | I |
T/R | 0.1505 | likely_benign | 0.1841 | benign | -0.554 | Destabilizing | 0.214 | N | 0.601 | neutral | None | None | None | None | I |
T/S | 0.1149 | likely_benign | 0.123 | benign | -1.156 | Destabilizing | 0.001 | N | 0.146 | neutral | N | 0.46746927 | None | None | I |
T/V | 0.1184 | likely_benign | 0.112 | benign | -0.822 | Destabilizing | 0.016 | N | 0.307 | neutral | None | None | None | None | I |
T/W | 0.4929 | ambiguous | 0.5603 | ambiguous | -1.289 | Destabilizing | 0.864 | D | 0.558 | neutral | None | None | None | None | I |
T/Y | 0.1913 | likely_benign | 0.2309 | benign | -1.048 | Destabilizing | 0.356 | N | 0.539 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.