Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8976 | 27151;27152;27153 | chr2:178713208;178713207;178713206 | chr2:179577935;179577934;179577933 |
N2AB | 8659 | 26200;26201;26202 | chr2:178713208;178713207;178713206 | chr2:179577935;179577934;179577933 |
N2A | 7732 | 23419;23420;23421 | chr2:178713208;178713207;178713206 | chr2:179577935;179577934;179577933 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1470719123 | -0.425 | 0.988 | N | 0.583 | 0.532 | 0.809640320441 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1470719123 | -0.425 | 0.988 | N | 0.583 | 0.532 | 0.809640320441 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4102 | ambiguous | 0.4424 | ambiguous | -1.09 | Destabilizing | 0.17 | N | 0.356 | neutral | None | None | None | None | N |
L/C | 0.5699 | likely_pathogenic | 0.6066 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | N |
L/D | 0.8553 | likely_pathogenic | 0.877 | pathogenic | -0.716 | Destabilizing | 0.991 | D | 0.589 | neutral | None | None | None | None | N |
L/E | 0.5543 | ambiguous | 0.5884 | pathogenic | -0.803 | Destabilizing | 0.991 | D | 0.578 | neutral | None | None | None | None | N |
L/F | 0.1022 | likely_benign | 0.1102 | benign | -1.157 | Destabilizing | 0.046 | N | 0.237 | neutral | None | None | None | None | N |
L/G | 0.7443 | likely_pathogenic | 0.7756 | pathogenic | -1.296 | Destabilizing | 0.939 | D | 0.547 | neutral | None | None | None | None | N |
L/H | 0.2867 | likely_benign | 0.3072 | benign | -0.708 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
L/I | 0.0974 | likely_benign | 0.1064 | benign | -0.65 | Destabilizing | 0.759 | D | 0.411 | neutral | None | None | None | None | N |
L/K | 0.4534 | ambiguous | 0.494 | ambiguous | -0.609 | Destabilizing | 0.991 | D | 0.555 | neutral | None | None | None | None | N |
L/M | 0.1112 | likely_benign | 0.1215 | benign | -0.382 | Destabilizing | 0.988 | D | 0.523 | neutral | N | 0.492519643 | None | None | N |
L/N | 0.5926 | likely_pathogenic | 0.6393 | pathogenic | -0.341 | Destabilizing | 0.997 | D | 0.58 | neutral | None | None | None | None | N |
L/P | 0.8079 | likely_pathogenic | 0.8315 | pathogenic | -0.764 | Destabilizing | 0.988 | D | 0.583 | neutral | N | 0.465218399 | None | None | N |
L/Q | 0.2433 | likely_benign | 0.2543 | benign | -0.631 | Destabilizing | 0.996 | D | 0.576 | neutral | N | 0.474048526 | None | None | N |
L/R | 0.2995 | likely_benign | 0.312 | benign | -0.014 | Destabilizing | 0.988 | D | 0.581 | neutral | N | 0.464351607 | None | None | N |
L/S | 0.4393 | ambiguous | 0.4862 | ambiguous | -0.816 | Destabilizing | 0.884 | D | 0.548 | neutral | None | None | None | None | N |
L/T | 0.3706 | ambiguous | 0.4077 | ambiguous | -0.796 | Destabilizing | 0.939 | D | 0.471 | neutral | None | None | None | None | N |
L/V | 0.0959 | likely_benign | 0.1025 | benign | -0.764 | Destabilizing | 0.134 | N | 0.244 | neutral | N | 0.456230769 | None | None | N |
L/W | 0.2425 | likely_benign | 0.2604 | benign | -1.175 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
L/Y | 0.3346 | likely_benign | 0.3542 | ambiguous | -0.903 | Destabilizing | 0.964 | D | 0.483 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.