Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8977 | 27154;27155;27156 | chr2:178713205;178713204;178713203 | chr2:179577932;179577931;179577930 |
N2AB | 8660 | 26203;26204;26205 | chr2:178713205;178713204;178713203 | chr2:179577932;179577931;179577930 |
N2A | 7733 | 23422;23423;23424 | chr2:178713205;178713204;178713203 | chr2:179577932;179577931;179577930 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.92 | N | 0.246 | 0.263 | 0.371344866733 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 2.28781E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1003 | likely_benign | 0.0929 | benign | -0.284 | Destabilizing | 0.704 | D | 0.237 | neutral | N | 0.43853323 | None | None | N |
T/C | 0.5918 | likely_pathogenic | 0.5395 | ambiguous | -0.075 | Destabilizing | 0.999 | D | 0.285 | neutral | None | None | None | None | N |
T/D | 0.4458 | ambiguous | 0.444 | ambiguous | 0.019 | Stabilizing | 0.884 | D | 0.257 | neutral | None | None | None | None | N |
T/E | 0.3394 | likely_benign | 0.3341 | benign | -0.073 | Destabilizing | 0.17 | N | 0.19 | neutral | None | None | None | None | N |
T/F | 0.277 | likely_benign | 0.2681 | benign | -0.857 | Destabilizing | 0.991 | D | 0.371 | neutral | None | None | None | None | N |
T/G | 0.2772 | likely_benign | 0.2541 | benign | -0.388 | Destabilizing | 0.939 | D | 0.265 | neutral | None | None | None | None | N |
T/H | 0.2761 | likely_benign | 0.2607 | benign | -0.737 | Destabilizing | 0.999 | D | 0.343 | neutral | None | None | None | None | N |
T/I | 0.2489 | likely_benign | 0.2477 | benign | -0.13 | Destabilizing | 0.134 | N | 0.165 | neutral | N | 0.481150644 | None | None | N |
T/K | 0.2121 | likely_benign | 0.2081 | benign | -0.28 | Destabilizing | 0.92 | D | 0.246 | neutral | N | 0.447478 | None | None | N |
T/L | 0.1313 | likely_benign | 0.1235 | benign | -0.13 | Destabilizing | 0.759 | D | 0.235 | neutral | None | None | None | None | N |
T/M | 0.0994 | likely_benign | 0.0961 | benign | 0.141 | Stabilizing | 0.991 | D | 0.271 | neutral | None | None | None | None | N |
T/N | 0.1534 | likely_benign | 0.1503 | benign | 0.022 | Stabilizing | 0.939 | D | 0.27 | neutral | None | None | None | None | N |
T/P | 0.3616 | ambiguous | 0.3295 | benign | -0.154 | Destabilizing | 0.988 | D | 0.291 | neutral | N | 0.4539454 | None | None | N |
T/Q | 0.2348 | likely_benign | 0.2267 | benign | -0.257 | Destabilizing | 0.982 | D | 0.289 | neutral | None | None | None | None | N |
T/R | 0.1467 | likely_benign | 0.1459 | benign | 0.005 | Stabilizing | 0.976 | D | 0.29 | neutral | N | 0.44805679 | None | None | N |
T/S | 0.1189 | likely_benign | 0.1069 | benign | -0.154 | Destabilizing | 0.159 | N | 0.1 | neutral | N | 0.431471185 | None | None | N |
T/V | 0.2022 | likely_benign | 0.1924 | benign | -0.154 | Destabilizing | 0.759 | D | 0.211 | neutral | None | None | None | None | N |
T/W | 0.5644 | likely_pathogenic | 0.5557 | ambiguous | -0.884 | Destabilizing | 0.999 | D | 0.409 | neutral | None | None | None | None | N |
T/Y | 0.3238 | likely_benign | 0.3204 | benign | -0.589 | Destabilizing | 0.997 | D | 0.353 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.