Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8978 | 27157;27158;27159 | chr2:178713202;178713201;178713200 | chr2:179577929;179577928;179577927 |
N2AB | 8661 | 26206;26207;26208 | chr2:178713202;178713201;178713200 | chr2:179577929;179577928;179577927 |
N2A | 7734 | 23425;23426;23427 | chr2:178713202;178713201;178713200 | chr2:179577929;179577928;179577927 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs773744166 | 0.386 | 0.998 | N | 0.438 | 0.346 | 0.194818534648 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.16218E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/H | rs773744166 | 0.386 | 0.998 | N | 0.438 | 0.346 | 0.194818534648 | gnomAD-4.0.0 | 3.1832E-06 | None | None | None | None | N | None | 0 | 4.5754E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.311 | likely_benign | 0.3343 | benign | 0.053 | Stabilizing | 0.925 | D | 0.471 | neutral | N | 0.471159284 | None | None | N |
D/C | 0.8348 | likely_pathogenic | 0.844 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
D/E | 0.2345 | likely_benign | 0.2334 | benign | -0.274 | Destabilizing | 0.961 | D | 0.401 | neutral | N | 0.470484493 | None | None | N |
D/F | 0.8248 | likely_pathogenic | 0.8568 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | N |
D/G | 0.191 | likely_benign | 0.2146 | benign | -0.041 | Destabilizing | 0.071 | N | 0.248 | neutral | N | 0.420418245 | None | None | N |
D/H | 0.553 | ambiguous | 0.5639 | ambiguous | 0.33 | Stabilizing | 0.998 | D | 0.438 | neutral | N | 0.511005751 | None | None | N |
D/I | 0.7273 | likely_pathogenic | 0.7746 | pathogenic | 0.23 | Stabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
D/K | 0.6444 | likely_pathogenic | 0.6525 | pathogenic | 0.524 | Stabilizing | 0.503 | D | 0.27 | neutral | None | None | None | None | N |
D/L | 0.6945 | likely_pathogenic | 0.7238 | pathogenic | 0.23 | Stabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
D/M | 0.8353 | likely_pathogenic | 0.8605 | pathogenic | 0.158 | Stabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
D/N | 0.1422 | likely_benign | 0.1553 | benign | 0.407 | Stabilizing | 0.433 | N | 0.218 | neutral | N | 0.467060186 | None | None | N |
D/P | 0.86 | likely_pathogenic | 0.8574 | pathogenic | 0.189 | Stabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | N |
D/Q | 0.5569 | ambiguous | 0.5642 | pathogenic | 0.386 | Stabilizing | 0.991 | D | 0.408 | neutral | None | None | None | None | N |
D/R | 0.6519 | likely_pathogenic | 0.6565 | pathogenic | 0.639 | Stabilizing | 0.983 | D | 0.485 | neutral | None | None | None | None | N |
D/S | 0.1921 | likely_benign | 0.2172 | benign | 0.303 | Stabilizing | 0.97 | D | 0.417 | neutral | None | None | None | None | N |
D/T | 0.4983 | ambiguous | 0.5318 | ambiguous | 0.377 | Stabilizing | 0.991 | D | 0.417 | neutral | None | None | None | None | N |
D/V | 0.4915 | ambiguous | 0.5475 | ambiguous | 0.189 | Stabilizing | 0.994 | D | 0.555 | neutral | N | 0.469988162 | None | None | N |
D/W | 0.9456 | likely_pathogenic | 0.9529 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/Y | 0.4456 | ambiguous | 0.4852 | ambiguous | 0.063 | Stabilizing | 0.998 | D | 0.554 | neutral | N | 0.474761102 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.