Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8981 | 27166;27167;27168 | chr2:178713193;178713192;178713191 | chr2:179577920;179577919;179577918 |
N2AB | 8664 | 26215;26216;26217 | chr2:178713193;178713192;178713191 | chr2:179577920;179577919;179577918 |
N2A | 7737 | 23434;23435;23436 | chr2:178713193;178713192;178713191 | chr2:179577920;179577919;179577918 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.681 | N | 0.793 | 0.245 | 0.56524285216 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5208 | ambiguous | 0.5742 | pathogenic | -1.684 | Destabilizing | 0.25 | N | 0.652 | neutral | None | None | None | None | N |
C/D | 0.9924 | likely_pathogenic | 0.9964 | pathogenic | -1.618 | Destabilizing | 0.85 | D | 0.803 | deleterious | None | None | None | None | N |
C/E | 0.9952 | likely_pathogenic | 0.9974 | pathogenic | -1.409 | Destabilizing | 0.85 | D | 0.801 | deleterious | None | None | None | None | N |
C/F | 0.5168 | ambiguous | 0.5966 | pathogenic | -1.198 | Destabilizing | 0.009 | N | 0.678 | prob.neutral | N | 0.510597532 | None | None | N |
C/G | 0.5038 | ambiguous | 0.5944 | pathogenic | -2.028 | Highly Destabilizing | 0.549 | D | 0.767 | deleterious | N | 0.453013453 | None | None | N |
C/H | 0.9446 | likely_pathogenic | 0.9678 | pathogenic | -2.383 | Highly Destabilizing | 0.992 | D | 0.79 | deleterious | None | None | None | None | N |
C/I | 0.7144 | likely_pathogenic | 0.7723 | pathogenic | -0.765 | Destabilizing | 0.447 | N | 0.785 | deleterious | None | None | None | None | N |
C/K | 0.9951 | likely_pathogenic | 0.9972 | pathogenic | -1.188 | Destabilizing | 0.85 | D | 0.804 | deleterious | None | None | None | None | N |
C/L | 0.6467 | likely_pathogenic | 0.6916 | pathogenic | -0.765 | Destabilizing | 0.447 | N | 0.747 | deleterious | None | None | None | None | N |
C/M | 0.8304 | likely_pathogenic | 0.8643 | pathogenic | 0.164 | Stabilizing | 0.92 | D | 0.773 | deleterious | None | None | None | None | N |
C/N | 0.9594 | likely_pathogenic | 0.9791 | pathogenic | -1.713 | Destabilizing | 0.85 | D | 0.799 | deleterious | None | None | None | None | N |
C/P | 0.9947 | likely_pathogenic | 0.9966 | pathogenic | -1.048 | Destabilizing | 0.92 | D | 0.813 | deleterious | None | None | None | None | N |
C/Q | 0.9795 | likely_pathogenic | 0.9877 | pathogenic | -1.323 | Destabilizing | 0.92 | D | 0.802 | deleterious | None | None | None | None | N |
C/R | 0.9551 | likely_pathogenic | 0.9712 | pathogenic | -1.535 | Destabilizing | 0.896 | D | 0.815 | deleterious | N | 0.494051999 | None | None | N |
C/S | 0.6146 | likely_pathogenic | 0.7231 | pathogenic | -2.0 | Highly Destabilizing | 0.045 | N | 0.621 | neutral | N | 0.422015755 | None | None | N |
C/T | 0.7831 | likely_pathogenic | 0.8401 | pathogenic | -1.608 | Destabilizing | 0.447 | N | 0.761 | deleterious | None | None | None | None | N |
C/V | 0.5535 | ambiguous | 0.6012 | pathogenic | -1.048 | Destabilizing | 0.447 | N | 0.755 | deleterious | None | None | None | None | N |
C/W | 0.8986 | likely_pathogenic | 0.9379 | pathogenic | -1.591 | Destabilizing | 0.99 | D | 0.777 | deleterious | N | 0.504981069 | None | None | N |
C/Y | 0.7753 | likely_pathogenic | 0.8529 | pathogenic | -1.377 | Destabilizing | 0.681 | D | 0.793 | deleterious | N | 0.4896649 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.