Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8983 | 27172;27173;27174 | chr2:178713187;178713186;178713185 | chr2:179577914;179577913;179577912 |
N2AB | 8666 | 26221;26222;26223 | chr2:178713187;178713186;178713185 | chr2:179577914;179577913;179577912 |
N2A | 7739 | 23440;23441;23442 | chr2:178713187;178713186;178713185 | chr2:179577914;179577913;179577912 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs878969676 | -1.569 | 0.99 | D | 0.598 | 0.58 | 0.510466299808 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/F | rs878969676 | -1.569 | 0.99 | D | 0.598 | 0.58 | 0.510466299808 | gnomAD-4.0.0 | 6.84241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99491E-06 | 0 | 0 |
L/V | rs2154296469 | None | 0.822 | D | 0.685 | 0.414 | 0.416075642716 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9253E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs2154296469 | None | 0.822 | D | 0.685 | 0.414 | 0.416075642716 | gnomAD-4.0.0 | 6.56711E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9372 | likely_pathogenic | 0.9533 | pathogenic | -2.245 | Highly Destabilizing | 0.076 | N | 0.644 | neutral | None | None | None | None | N |
L/C | 0.9173 | likely_pathogenic | 0.9479 | pathogenic | -1.519 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -3.121 | Highly Destabilizing | 0.956 | D | 0.858 | deleterious | None | None | None | None | N |
L/E | 0.9953 | likely_pathogenic | 0.9973 | pathogenic | -2.795 | Highly Destabilizing | 0.956 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.4301 | ambiguous | 0.501 | ambiguous | -1.317 | Destabilizing | 0.99 | D | 0.598 | neutral | D | 0.544575722 | None | None | N |
L/G | 0.9892 | likely_pathogenic | 0.9926 | pathogenic | -2.851 | Highly Destabilizing | 0.956 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9831 | likely_pathogenic | 0.9908 | pathogenic | -2.801 | Highly Destabilizing | 0.994 | D | 0.87 | deleterious | None | None | None | None | N |
L/I | 0.2688 | likely_benign | 0.3407 | ambiguous | -0.424 | Destabilizing | 0.904 | D | 0.673 | neutral | D | 0.535167973 | None | None | N |
L/K | 0.9904 | likely_pathogenic | 0.9943 | pathogenic | -1.572 | Destabilizing | 0.754 | D | 0.833 | deleterious | None | None | None | None | N |
L/M | 0.2633 | likely_benign | 0.3058 | benign | -0.713 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | N |
L/N | 0.9955 | likely_pathogenic | 0.9972 | pathogenic | -2.321 | Highly Destabilizing | 0.956 | D | 0.859 | deleterious | None | None | None | None | N |
L/P | 0.9973 | likely_pathogenic | 0.9984 | pathogenic | -1.022 | Destabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | N |
L/Q | 0.9742 | likely_pathogenic | 0.9849 | pathogenic | -1.927 | Destabilizing | 0.956 | D | 0.841 | deleterious | None | None | None | None | N |
L/R | 0.9777 | likely_pathogenic | 0.9874 | pathogenic | -1.836 | Destabilizing | 0.043 | N | 0.733 | prob.delet. | None | None | None | None | N |
L/S | 0.9894 | likely_pathogenic | 0.9938 | pathogenic | -2.806 | Highly Destabilizing | 0.89 | D | 0.831 | deleterious | D | 0.582812148 | None | None | N |
L/T | 0.9761 | likely_pathogenic | 0.9851 | pathogenic | -2.311 | Highly Destabilizing | 0.86 | D | 0.778 | deleterious | None | None | None | None | N |
L/V | 0.2897 | likely_benign | 0.3565 | ambiguous | -1.022 | Destabilizing | 0.822 | D | 0.685 | prob.neutral | D | 0.546804221 | None | None | N |
L/W | 0.9258 | likely_pathogenic | 0.9567 | pathogenic | -1.774 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
L/Y | 0.9425 | likely_pathogenic | 0.9613 | pathogenic | -1.5 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.