Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8989 | 27190;27191;27192 | chr2:178713169;178713168;178713167 | chr2:179577896;179577895;179577894 |
N2AB | 8672 | 26239;26240;26241 | chr2:178713169;178713168;178713167 | chr2:179577896;179577895;179577894 |
N2A | 7745 | 23458;23459;23460 | chr2:178713169;178713168;178713167 | chr2:179577896;179577895;179577894 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.002 | N | 0.106 | 0.066 | 0.212008924253 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79898E-06 | 0 | 0 |
E/G | None | None | 0.001 | N | 0.15 | 0.173 | 0.3571064206 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1281 | likely_benign | 0.1298 | benign | -0.69 | Destabilizing | 0.002 | N | 0.126 | neutral | N | 0.465450472 | None | None | N |
E/C | 0.7299 | likely_pathogenic | 0.7445 | pathogenic | -0.109 | Destabilizing | 0.983 | D | 0.325 | neutral | None | None | None | None | N |
E/D | 0.1154 | likely_benign | 0.1187 | benign | -0.435 | Destabilizing | 0.002 | N | 0.106 | neutral | N | 0.41417629 | None | None | N |
E/F | 0.6566 | likely_pathogenic | 0.6488 | pathogenic | -0.396 | Destabilizing | 0.94 | D | 0.351 | neutral | None | None | None | None | N |
E/G | 0.1087 | likely_benign | 0.1146 | benign | -0.936 | Destabilizing | 0.001 | N | 0.15 | neutral | N | 0.469010853 | None | None | N |
E/H | 0.3129 | likely_benign | 0.2988 | benign | -0.328 | Destabilizing | 0.836 | D | 0.283 | neutral | None | None | None | None | N |
E/I | 0.3291 | likely_benign | 0.3346 | benign | -0.054 | Destabilizing | 0.716 | D | 0.394 | neutral | None | None | None | None | N |
E/K | 0.0916 | likely_benign | 0.0977 | benign | 0.21 | Stabilizing | 0.007 | N | 0.137 | neutral | N | 0.39959084 | None | None | N |
E/L | 0.2402 | likely_benign | 0.2434 | benign | -0.054 | Destabilizing | 0.418 | N | 0.389 | neutral | None | None | None | None | N |
E/M | 0.3326 | likely_benign | 0.3398 | benign | 0.232 | Stabilizing | 0.836 | D | 0.329 | neutral | None | None | None | None | N |
E/N | 0.1846 | likely_benign | 0.1969 | benign | -0.27 | Destabilizing | 0.01 | N | 0.155 | neutral | None | None | None | None | N |
E/P | 0.7944 | likely_pathogenic | 0.7797 | pathogenic | -0.246 | Destabilizing | 0.593 | D | 0.367 | neutral | None | None | None | None | N |
E/Q | 0.0928 | likely_benign | 0.0921 | benign | -0.202 | Destabilizing | 0.007 | N | 0.098 | neutral | N | 0.42956703 | None | None | N |
E/R | 0.1515 | likely_benign | 0.1532 | benign | 0.398 | Stabilizing | 0.264 | N | 0.167 | neutral | None | None | None | None | N |
E/S | 0.1416 | likely_benign | 0.1409 | benign | -0.449 | Destabilizing | 0.129 | N | 0.195 | neutral | None | None | None | None | N |
E/T | 0.16 | likely_benign | 0.163 | benign | -0.236 | Destabilizing | 0.01 | N | 0.14 | neutral | None | None | None | None | N |
E/V | 0.1803 | likely_benign | 0.1842 | benign | -0.246 | Destabilizing | 0.213 | N | 0.39 | neutral | N | 0.434610277 | None | None | N |
E/W | 0.7933 | likely_pathogenic | 0.7859 | pathogenic | -0.147 | Destabilizing | 0.983 | D | 0.356 | neutral | None | None | None | None | N |
E/Y | 0.5146 | ambiguous | 0.5152 | ambiguous | -0.129 | Destabilizing | 0.94 | D | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.