Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8990 | 27193;27194;27195 | chr2:178713166;178713165;178713164 | chr2:179577893;179577892;179577891 |
N2AB | 8673 | 26242;26243;26244 | chr2:178713166;178713165;178713164 | chr2:179577893;179577892;179577891 |
N2A | 7746 | 23461;23462;23463 | chr2:178713166;178713165;178713164 | chr2:179577893;179577892;179577891 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | None | N | 0.116 | 0.09 | 0.186928172975 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0733 | likely_benign | 0.0746 | benign | -0.205 | Destabilizing | 0.003 | N | 0.175 | neutral | N | 0.404702218 | None | None | N |
E/C | 0.5385 | ambiguous | 0.6337 | pathogenic | 0.102 | Stabilizing | 0.497 | N | 0.233 | neutral | None | None | None | None | N |
E/D | 0.0659 | likely_benign | 0.0823 | benign | -0.237 | Destabilizing | None | N | 0.082 | neutral | N | 0.459691496 | None | None | N |
E/F | 0.3891 | ambiguous | 0.4423 | ambiguous | -0.227 | Destabilizing | 0.138 | N | 0.332 | neutral | None | None | None | None | N |
E/G | 0.0731 | likely_benign | 0.0794 | benign | -0.347 | Destabilizing | None | N | 0.121 | neutral | N | 0.487704817 | None | None | N |
E/H | 0.213 | likely_benign | 0.2405 | benign | 0.102 | Stabilizing | 0.245 | N | 0.19 | neutral | None | None | None | None | N |
E/I | 0.1542 | likely_benign | 0.1827 | benign | 0.12 | Stabilizing | 0.022 | N | 0.316 | neutral | None | None | None | None | N |
E/K | 0.0775 | likely_benign | 0.0793 | benign | 0.586 | Stabilizing | None | N | 0.116 | neutral | N | 0.440796304 | None | None | N |
E/L | 0.1812 | likely_benign | 0.2128 | benign | 0.12 | Stabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
E/M | 0.2405 | likely_benign | 0.2672 | benign | 0.166 | Stabilizing | 0.002 | N | 0.156 | neutral | None | None | None | None | N |
E/N | 0.1018 | likely_benign | 0.1367 | benign | 0.292 | Stabilizing | 0.009 | N | 0.132 | neutral | None | None | None | None | N |
E/P | 0.1662 | likely_benign | 0.1749 | benign | 0.031 | Stabilizing | 0.085 | N | 0.273 | neutral | None | None | None | None | N |
E/Q | 0.0984 | likely_benign | 0.0999 | benign | 0.308 | Stabilizing | 0.001 | N | 0.214 | neutral | N | 0.470657851 | None | None | N |
E/R | 0.1322 | likely_benign | 0.1298 | benign | 0.684 | Stabilizing | 0.022 | N | 0.128 | neutral | None | None | None | None | N |
E/S | 0.0892 | likely_benign | 0.1012 | benign | 0.173 | Stabilizing | 0.009 | N | 0.142 | neutral | None | None | None | None | N |
E/T | 0.112 | likely_benign | 0.1219 | benign | 0.297 | Stabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
E/V | 0.1029 | likely_benign | 0.117 | benign | 0.031 | Stabilizing | 0.007 | N | 0.177 | neutral | N | 0.460190142 | None | None | N |
E/W | 0.5972 | likely_pathogenic | 0.6257 | pathogenic | -0.138 | Destabilizing | 0.788 | D | 0.232 | neutral | None | None | None | None | N |
E/Y | 0.2432 | likely_benign | 0.2948 | benign | 0.009 | Stabilizing | 0.497 | N | 0.309 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.