Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8991 | 27196;27197;27198 | chr2:178713163;178713162;178713161 | chr2:179577890;179577889;179577888 |
N2AB | 8674 | 26245;26246;26247 | chr2:178713163;178713162;178713161 | chr2:179577890;179577889;179577888 |
N2A | 7747 | 23464;23465;23466 | chr2:178713163;178713162;178713161 | chr2:179577890;179577889;179577888 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | None | N | 0.158 | 0.188 | 0.318540980066 | gnomAD-4.0.0 | 2.73697E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59796E-06 | 0 | 0 |
S/T | rs1196970507 | 0.126 | None | N | 0.1 | 0.106 | 0.0401082797425 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
S/T | rs1196970507 | 0.126 | None | N | 0.1 | 0.106 | 0.0401082797425 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0695 | likely_benign | 0.0692 | benign | -0.253 | Destabilizing | None | N | 0.089 | neutral | N | 0.481472278 | None | None | N |
S/C | 0.1415 | likely_benign | 0.1562 | benign | -0.16 | Destabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | N |
S/D | 0.1812 | likely_benign | 0.1932 | benign | -0.023 | Destabilizing | 0.072 | N | 0.294 | neutral | None | None | None | None | N |
S/E | 0.2596 | likely_benign | 0.2649 | benign | -0.132 | Destabilizing | 0.072 | N | 0.22 | neutral | None | None | None | None | N |
S/F | 0.1498 | likely_benign | 0.1517 | benign | -0.902 | Destabilizing | 0.214 | N | 0.461 | neutral | None | None | None | None | N |
S/G | 0.0763 | likely_benign | 0.0816 | benign | -0.338 | Destabilizing | 0.016 | N | 0.233 | neutral | None | None | None | None | N |
S/H | 0.2289 | likely_benign | 0.2399 | benign | -0.776 | Destabilizing | 0.628 | D | 0.361 | neutral | None | None | None | None | N |
S/I | 0.1361 | likely_benign | 0.1406 | benign | -0.164 | Destabilizing | None | N | 0.216 | neutral | None | None | None | None | N |
S/K | 0.3176 | likely_benign | 0.3357 | benign | -0.423 | Destabilizing | 0.072 | N | 0.219 | neutral | None | None | None | None | N |
S/L | 0.0928 | likely_benign | 0.0935 | benign | -0.164 | Destabilizing | None | N | 0.158 | neutral | N | 0.508178876 | None | None | N |
S/M | 0.1466 | likely_benign | 0.1467 | benign | 0.099 | Stabilizing | 0.214 | N | 0.386 | neutral | None | None | None | None | N |
S/N | 0.0891 | likely_benign | 0.1033 | benign | -0.08 | Destabilizing | 0.072 | N | 0.322 | neutral | None | None | None | None | N |
S/P | 0.1986 | likely_benign | 0.188 | benign | -0.167 | Destabilizing | 0.171 | N | 0.445 | neutral | N | 0.485409845 | None | None | N |
S/Q | 0.3158 | likely_benign | 0.3322 | benign | -0.374 | Destabilizing | 0.356 | N | 0.342 | neutral | None | None | None | None | N |
S/R | 0.2827 | likely_benign | 0.3077 | benign | -0.136 | Destabilizing | 0.214 | N | 0.425 | neutral | None | None | None | None | N |
S/T | 0.0683 | likely_benign | 0.0718 | benign | -0.201 | Destabilizing | None | N | 0.1 | neutral | N | 0.484781942 | None | None | N |
S/V | 0.1451 | likely_benign | 0.1473 | benign | -0.167 | Destabilizing | None | N | 0.137 | neutral | None | None | None | None | N |
S/W | 0.2083 | likely_benign | 0.2105 | benign | -0.935 | Destabilizing | 0.864 | D | 0.408 | neutral | None | None | None | None | N |
S/Y | 0.1443 | likely_benign | 0.1437 | benign | -0.648 | Destabilizing | 0.356 | N | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.