Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8992 | 27199;27200;27201 | chr2:178713160;178713159;178713158 | chr2:179577887;179577886;179577885 |
N2AB | 8675 | 26248;26249;26250 | chr2:178713160;178713159;178713158 | chr2:179577887;179577886;179577885 |
N2A | 7748 | 23467;23468;23469 | chr2:178713160;178713159;178713158 | chr2:179577887;179577886;179577885 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | D | 0.861 | 0.589 | 0.626919690049 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8481 | likely_pathogenic | 0.8974 | pathogenic | 0.535 | Stabilizing | 0.992 | D | 0.813 | deleterious | D | 0.665928132 | None | None | N |
D/C | 0.9576 | likely_pathogenic | 0.9668 | pathogenic | 0.43 | Stabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
D/E | 0.807 | likely_pathogenic | 0.8317 | pathogenic | -0.621 | Destabilizing | 0.996 | D | 0.621 | neutral | D | 0.619445199 | None | None | N |
D/F | 0.9753 | likely_pathogenic | 0.9824 | pathogenic | 1.066 | Stabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
D/G | 0.8951 | likely_pathogenic | 0.9271 | pathogenic | 0.037 | Stabilizing | 0.996 | D | 0.791 | deleterious | D | 0.666129936 | None | None | N |
D/H | 0.8101 | likely_pathogenic | 0.8378 | pathogenic | 0.592 | Stabilizing | 1.0 | D | 0.861 | deleterious | D | 0.592503381 | None | None | N |
D/I | 0.9615 | likely_pathogenic | 0.9737 | pathogenic | 1.881 | Stabilizing | 0.998 | D | 0.884 | deleterious | None | None | None | None | N |
D/K | 0.9644 | likely_pathogenic | 0.9761 | pathogenic | 0.155 | Stabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
D/L | 0.9637 | likely_pathogenic | 0.9739 | pathogenic | 1.881 | Stabilizing | 0.998 | D | 0.888 | deleterious | None | None | None | None | N |
D/M | 0.981 | likely_pathogenic | 0.9875 | pathogenic | 2.337 | Highly Stabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
D/N | 0.6046 | likely_pathogenic | 0.6656 | pathogenic | -0.635 | Destabilizing | 0.999 | D | 0.797 | deleterious | D | 0.597218113 | None | None | N |
D/P | 0.9905 | likely_pathogenic | 0.9934 | pathogenic | 1.463 | Stabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
D/Q | 0.9349 | likely_pathogenic | 0.95 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
D/R | 0.9683 | likely_pathogenic | 0.976 | pathogenic | 0.021 | Stabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
D/S | 0.717 | likely_pathogenic | 0.7834 | pathogenic | -0.979 | Destabilizing | 0.988 | D | 0.669 | neutral | None | None | None | None | N |
D/T | 0.9248 | likely_pathogenic | 0.9452 | pathogenic | -0.515 | Destabilizing | 0.833 | D | 0.501 | neutral | None | None | None | None | N |
D/V | 0.8987 | likely_pathogenic | 0.9251 | pathogenic | 1.463 | Stabilizing | 0.998 | D | 0.887 | deleterious | D | 0.666533545 | None | None | N |
D/W | 0.9958 | likely_pathogenic | 0.9968 | pathogenic | 0.949 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
D/Y | 0.8716 | likely_pathogenic | 0.9038 | pathogenic | 1.296 | Stabilizing | 1.0 | D | 0.908 | deleterious | D | 0.628953231 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.