Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8994 | 27205;27206;27207 | chr2:178713154;178713153;178713152 | chr2:179577881;179577880;179577879 |
N2AB | 8677 | 26254;26255;26256 | chr2:178713154;178713153;178713152 | chr2:179577881;179577880;179577879 |
N2A | 7750 | 23473;23474;23475 | chr2:178713154;178713153;178713152 | chr2:179577881;179577880;179577879 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 0.999 | D | 0.833 | 0.631 | 0.893417946627 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2711 | likely_benign | 0.3226 | benign | -0.823 | Destabilizing | 0.995 | D | 0.802 | deleterious | D | 0.560075359 | None | None | N |
G/C | 0.5334 | ambiguous | 0.6679 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.658552455 | None | None | N |
G/D | 0.6021 | likely_pathogenic | 0.7272 | pathogenic | -1.819 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.609858599 | None | None | N |
G/E | 0.713 | likely_pathogenic | 0.8371 | pathogenic | -1.824 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
G/F | 0.9155 | likely_pathogenic | 0.9565 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/H | 0.819 | likely_pathogenic | 0.8989 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
G/I | 0.8768 | likely_pathogenic | 0.9434 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/K | 0.76 | likely_pathogenic | 0.8715 | pathogenic | -1.301 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
G/L | 0.8503 | likely_pathogenic | 0.9198 | pathogenic | -0.256 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
G/M | 0.8774 | likely_pathogenic | 0.9374 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/N | 0.7418 | likely_pathogenic | 0.8414 | pathogenic | -1.085 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
G/P | 0.9884 | likely_pathogenic | 0.9925 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/Q | 0.7172 | likely_pathogenic | 0.8295 | pathogenic | -1.211 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
G/R | 0.579 | likely_pathogenic | 0.7287 | pathogenic | -1.055 | Destabilizing | 0.777 | D | 0.782 | deleterious | D | 0.658350651 | None | None | N |
G/S | 0.224 | likely_benign | 0.2962 | benign | -1.308 | Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.63240893 | None | None | N |
G/T | 0.6311 | likely_pathogenic | 0.7492 | pathogenic | -1.239 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
G/V | 0.7485 | likely_pathogenic | 0.8617 | pathogenic | -0.404 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.642533094 | None | None | N |
G/W | 0.8524 | likely_pathogenic | 0.9112 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
G/Y | 0.8949 | likely_pathogenic | 0.9456 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.