Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9000 | 27223;27224;27225 | chr2:178713136;178713135;178713134 | chr2:179577863;179577862;179577861 |
N2AB | 8683 | 26272;26273;26274 | chr2:178713136;178713135;178713134 | chr2:179577863;179577862;179577861 |
N2A | 7756 | 23491;23492;23493 | chr2:178713136;178713135;178713134 | chr2:179577863;179577862;179577861 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs752994608 | None | 0.79 | N | 0.399 | 0.527 | 0.672978241467 | gnomAD-4.0.0 | 4.78971E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29645E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9007 | likely_pathogenic | 0.9071 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
A/D | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -2.791 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.655252147 | None | None | N |
A/E | 0.9958 | likely_pathogenic | 0.9968 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
A/F | 0.9612 | likely_pathogenic | 0.9629 | pathogenic | -1.011 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
A/G | 0.5675 | likely_pathogenic | 0.5618 | ambiguous | -1.78 | Destabilizing | 0.999 | D | 0.597 | neutral | D | 0.591931918 | None | None | N |
A/H | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
A/I | 0.7673 | likely_pathogenic | 0.787 | pathogenic | -0.376 | Destabilizing | 0.988 | D | 0.747 | deleterious | None | None | None | None | N |
A/K | 0.9986 | likely_pathogenic | 0.999 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/L | 0.7286 | likely_pathogenic | 0.7466 | pathogenic | -0.376 | Destabilizing | 0.988 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/M | 0.8824 | likely_pathogenic | 0.8978 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
A/N | 0.9957 | likely_pathogenic | 0.9967 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
A/P | 0.9901 | likely_pathogenic | 0.9933 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.617671834 | None | None | N |
A/Q | 0.9913 | likely_pathogenic | 0.9929 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/R | 0.9931 | likely_pathogenic | 0.9941 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/S | 0.5168 | ambiguous | 0.5527 | ambiguous | -2.099 | Highly Destabilizing | 0.996 | D | 0.613 | neutral | D | 0.617268226 | None | None | N |
A/T | 0.6409 | likely_pathogenic | 0.6865 | pathogenic | -1.848 | Destabilizing | 0.992 | D | 0.682 | prob.neutral | D | 0.638193405 | None | None | N |
A/V | 0.4333 | ambiguous | 0.4532 | ambiguous | -0.676 | Destabilizing | 0.79 | D | 0.399 | neutral | N | 0.502188693 | None | None | N |
A/W | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
A/Y | 0.9942 | likely_pathogenic | 0.9949 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.