Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9003 | 27232;27233;27234 | chr2:178713127;178713126;178713125 | chr2:179577854;179577853;179577852 |
N2AB | 8686 | 26281;26282;26283 | chr2:178713127;178713126;178713125 | chr2:179577854;179577853;179577852 |
N2A | 7759 | 23500;23501;23502 | chr2:178713127;178713126;178713125 | chr2:179577854;179577853;179577852 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | None | N | 0.181 | 0.137 | 0.15556083564 | gnomAD-4.0.0 | 1.3685E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31916E-05 | 0 |
M/T | rs2076906083 | None | None | N | 0.183 | 0.098 | 0.393775345888 | gnomAD-4.0.0 | 4.78977E-06 | None | None | None | None | I | None | 8.96325E-05 | 0 | None | 0 | 2.52016E-05 | None | 0 | 0 | 1.79901E-06 | 1.15955E-05 | 0 |
M/V | None | None | None | N | 0.173 | 0.074 | 0.165133752707 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.114 | likely_benign | 0.1115 | benign | -0.16 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | I |
M/C | 0.633 | likely_pathogenic | 0.5758 | pathogenic | -0.362 | Destabilizing | 0.041 | N | 0.359 | neutral | None | None | None | None | I |
M/D | 0.3469 | ambiguous | 0.3448 | ambiguous | 0.329 | Stabilizing | None | N | 0.239 | neutral | None | None | None | None | I |
M/E | 0.159 | likely_benign | 0.17 | benign | 0.259 | Stabilizing | None | N | 0.201 | neutral | None | None | None | None | I |
M/F | 0.1864 | likely_benign | 0.2162 | benign | -0.231 | Destabilizing | 0.009 | N | 0.266 | neutral | None | None | None | None | I |
M/G | 0.2473 | likely_benign | 0.2587 | benign | -0.229 | Destabilizing | None | N | 0.259 | neutral | None | None | None | None | I |
M/H | 0.2716 | likely_benign | 0.2586 | benign | 0.362 | Stabilizing | 0.116 | N | 0.403 | neutral | None | None | None | None | I |
M/I | 0.0947 | likely_benign | 0.1098 | benign | -0.079 | Destabilizing | None | N | 0.181 | neutral | N | 0.413712143 | None | None | I |
M/K | 0.0845 | likely_benign | 0.0916 | benign | 0.426 | Stabilizing | None | N | 0.185 | neutral | N | 0.362781891 | None | None | I |
M/L | 0.0927 | likely_benign | 0.0975 | benign | -0.079 | Destabilizing | None | N | 0.266 | neutral | N | 0.397203895 | None | None | I |
M/N | 0.1843 | likely_benign | 0.1913 | benign | 0.565 | Stabilizing | 0.002 | N | 0.325 | neutral | None | None | None | None | I |
M/P | 0.3345 | likely_benign | 0.3544 | ambiguous | -0.085 | Destabilizing | 0.008 | N | 0.325 | neutral | None | None | None | None | I |
M/Q | 0.1256 | likely_benign | 0.1275 | benign | 0.405 | Stabilizing | 0.004 | N | 0.263 | neutral | None | None | None | None | I |
M/R | 0.0807 | likely_benign | 0.0911 | benign | 0.828 | Stabilizing | 0.001 | N | 0.315 | neutral | N | 0.396145103 | None | None | I |
M/S | 0.1421 | likely_benign | 0.1393 | benign | 0.182 | Stabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
M/T | 0.0736 | likely_benign | 0.0723 | benign | 0.194 | Stabilizing | None | N | 0.183 | neutral | N | 0.390296566 | None | None | I |
M/V | 0.0459 | likely_benign | 0.0498 | benign | -0.085 | Destabilizing | None | N | 0.173 | neutral | N | 0.416405732 | None | None | I |
M/W | 0.4674 | ambiguous | 0.4899 | ambiguous | -0.254 | Destabilizing | 0.316 | N | 0.304 | neutral | None | None | None | None | I |
M/Y | 0.377 | ambiguous | 0.3853 | ambiguous | -0.041 | Destabilizing | 0.018 | N | 0.351 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.