Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9005 | 27238;27239;27240 | chr2:178713121;178713120;178713119 | chr2:179577848;179577847;179577846 |
N2AB | 8688 | 26287;26288;26289 | chr2:178713121;178713120;178713119 | chr2:179577848;179577847;179577846 |
N2A | 7761 | 23506;23507;23508 | chr2:178713121;178713120;178713119 | chr2:179577848;179577847;179577846 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs939492024 | None | 1.0 | D | 0.855 | 0.759 | 0.85784730175 | gnomAD-4.0.0 | 1.36852E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7754 | likely_pathogenic | 0.8065 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.597818192 | None | None | I |
G/C | 0.936 | likely_pathogenic | 0.9349 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.654516369 | None | None | I |
G/D | 0.909 | likely_pathogenic | 0.9163 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.604611688 | None | None | I |
G/E | 0.942 | likely_pathogenic | 0.949 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/F | 0.9789 | likely_pathogenic | 0.9807 | pathogenic | -1.155 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/H | 0.9704 | likely_pathogenic | 0.9739 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/I | 0.9775 | likely_pathogenic | 0.9831 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/K | 0.9638 | likely_pathogenic | 0.9701 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/L | 0.9766 | likely_pathogenic | 0.9794 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/M | 0.9845 | likely_pathogenic | 0.9866 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/N | 0.9427 | likely_pathogenic | 0.9467 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
G/P | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
G/Q | 0.9501 | likely_pathogenic | 0.9556 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/R | 0.9068 | likely_pathogenic | 0.9204 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.621468626 | None | None | I |
G/S | 0.6195 | likely_pathogenic | 0.6562 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.595123297 | None | None | I |
G/T | 0.9273 | likely_pathogenic | 0.9373 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/V | 0.9492 | likely_pathogenic | 0.9605 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.654112761 | None | None | I |
G/W | 0.9697 | likely_pathogenic | 0.9724 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
G/Y | 0.9699 | likely_pathogenic | 0.9721 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.