Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9006 | 27241;27242;27243 | chr2:178713118;178713117;178713116 | chr2:179577845;179577844;179577843 |
N2AB | 8689 | 26290;26291;26292 | chr2:178713118;178713117;178713116 | chr2:179577845;179577844;179577843 |
N2A | 7762 | 23509;23510;23511 | chr2:178713118;178713117;178713116 | chr2:179577845;179577844;179577843 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.035 | N | 0.385 | 0.318 | 0.630674063255 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1024 | likely_benign | 0.1073 | benign | -0.511 | Destabilizing | 0.826 | D | 0.327 | neutral | N | 0.496810742 | None | None | I |
S/C | 0.1781 | likely_benign | 0.1651 | benign | -0.378 | Destabilizing | 0.999 | D | 0.467 | neutral | N | 0.510966742 | None | None | I |
S/D | 0.3589 | ambiguous | 0.3959 | ambiguous | -0.142 | Destabilizing | 0.969 | D | 0.371 | neutral | None | None | None | None | I |
S/E | 0.3955 | ambiguous | 0.4095 | ambiguous | -0.225 | Destabilizing | 0.969 | D | 0.331 | neutral | None | None | None | None | I |
S/F | 0.1904 | likely_benign | 0.1872 | benign | -0.997 | Destabilizing | 0.035 | N | 0.385 | neutral | N | 0.501750031 | None | None | I |
S/G | 0.1287 | likely_benign | 0.1386 | benign | -0.652 | Destabilizing | 0.969 | D | 0.315 | neutral | None | None | None | None | I |
S/H | 0.2606 | likely_benign | 0.2576 | benign | -1.163 | Destabilizing | 0.999 | D | 0.47 | neutral | None | None | None | None | I |
S/I | 0.1921 | likely_benign | 0.1982 | benign | -0.262 | Destabilizing | 0.939 | D | 0.536 | neutral | None | None | None | None | I |
S/K | 0.3893 | ambiguous | 0.4131 | ambiguous | -0.666 | Destabilizing | 0.939 | D | 0.347 | neutral | None | None | None | None | I |
S/L | 0.1344 | likely_benign | 0.1351 | benign | -0.262 | Destabilizing | 0.884 | D | 0.509 | neutral | None | None | None | None | I |
S/M | 0.2123 | likely_benign | 0.2105 | benign | 0.082 | Stabilizing | 0.997 | D | 0.472 | neutral | None | None | None | None | I |
S/N | 0.13 | likely_benign | 0.14 | benign | -0.42 | Destabilizing | 0.969 | D | 0.417 | neutral | None | None | None | None | I |
S/P | 0.7857 | likely_pathogenic | 0.7908 | pathogenic | -0.315 | Destabilizing | 0.996 | D | 0.455 | neutral | N | 0.501496541 | None | None | I |
S/Q | 0.3487 | ambiguous | 0.3559 | ambiguous | -0.709 | Destabilizing | 0.997 | D | 0.429 | neutral | None | None | None | None | I |
S/R | 0.294 | likely_benign | 0.3118 | benign | -0.4 | Destabilizing | 0.991 | D | 0.469 | neutral | None | None | None | None | I |
S/T | 0.0823 | likely_benign | 0.0832 | benign | -0.516 | Destabilizing | 0.061 | N | 0.137 | neutral | N | 0.458735144 | None | None | I |
S/V | 0.2075 | likely_benign | 0.211 | benign | -0.315 | Destabilizing | 0.939 | D | 0.531 | neutral | None | None | None | None | I |
S/W | 0.3386 | likely_benign | 0.3303 | benign | -0.964 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | I |
S/Y | 0.1756 | likely_benign | 0.1735 | benign | -0.713 | Destabilizing | 0.953 | D | 0.56 | neutral | N | 0.499356948 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.