Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9009 | 27250;27251;27252 | chr2:178713109;178713108;178713107 | chr2:179577836;179577835;179577834 |
N2AB | 8692 | 26299;26300;26301 | chr2:178713109;178713108;178713107 | chr2:179577836;179577835;179577834 |
N2A | 7765 | 23518;23519;23520 | chr2:178713109;178713108;178713107 | chr2:179577836;179577835;179577834 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs369287578 | -2.722 | 0.999 | N | 0.797 | 0.387 | 0.853887960626 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
C/G | rs369287578 | -2.722 | 0.999 | N | 0.797 | 0.387 | 0.853887960626 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
C/R | rs369287578 | -1.172 | 0.999 | N | 0.847 | 0.482 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
C/R | rs369287578 | -1.172 | 0.999 | N | 0.847 | 0.482 | None | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | N | None | 0 | 2.28718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5454 | ambiguous | 0.5357 | ambiguous | -1.957 | Destabilizing | 0.994 | D | 0.563 | neutral | None | None | None | None | N |
C/D | 0.8937 | likely_pathogenic | 0.9078 | pathogenic | -0.857 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
C/E | 0.9689 | likely_pathogenic | 0.9747 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
C/F | 0.5986 | likely_pathogenic | 0.652 | pathogenic | -1.215 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.513433633 | None | None | N |
C/G | 0.3389 | likely_benign | 0.3478 | ambiguous | -2.286 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | N | 0.509123892 | None | None | N |
C/H | 0.9066 | likely_pathogenic | 0.9231 | pathogenic | -2.268 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
C/I | 0.7072 | likely_pathogenic | 0.763 | pathogenic | -1.091 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
C/K | 0.9818 | likely_pathogenic | 0.9865 | pathogenic | -1.311 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
C/L | 0.7532 | likely_pathogenic | 0.7807 | pathogenic | -1.091 | Destabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | N |
C/M | 0.7868 | likely_pathogenic | 0.8064 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
C/N | 0.7514 | likely_pathogenic | 0.7808 | pathogenic | -1.37 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
C/P | 0.9971 | likely_pathogenic | 0.9977 | pathogenic | -1.355 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
C/Q | 0.9368 | likely_pathogenic | 0.9446 | pathogenic | -1.234 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
C/R | 0.9114 | likely_pathogenic | 0.9294 | pathogenic | -1.198 | Destabilizing | 0.999 | D | 0.847 | deleterious | N | 0.504563434 | None | None | N |
C/S | 0.3092 | likely_benign | 0.3234 | benign | -1.905 | Destabilizing | 0.997 | D | 0.692 | prob.neutral | N | 0.410882482 | None | None | N |
C/T | 0.3505 | ambiguous | 0.3496 | ambiguous | -1.594 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/V | 0.5501 | ambiguous | 0.5862 | pathogenic | -1.355 | Destabilizing | 0.997 | D | 0.661 | neutral | None | None | None | None | N |
C/W | 0.9035 | likely_pathogenic | 0.9248 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.517994091 | None | None | N |
C/Y | 0.763 | likely_pathogenic | 0.8164 | pathogenic | -1.253 | Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.532462111 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.