Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9015 | 27268;27269;27270 | chr2:178713091;178713090;178713089 | chr2:179577818;179577817;179577816 |
N2AB | 8698 | 26317;26318;26319 | chr2:178713091;178713090;178713089 | chr2:179577818;179577817;179577816 |
N2A | 7771 | 23536;23537;23538 | chr2:178713091;178713090;178713089 | chr2:179577818;179577817;179577816 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1478991979 | -0.322 | 0.638 | D | 0.724 | 0.58 | 0.587237122171 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/M | rs1478991979 | -0.322 | 0.638 | D | 0.724 | 0.58 | 0.587237122171 | gnomAD-4.0.0 | 1.59532E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86804E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6116 | likely_pathogenic | 0.6431 | pathogenic | -1.383 | Destabilizing | 0.334 | N | 0.613 | neutral | D | 0.629430074 | None | None | N |
V/C | 0.9268 | likely_pathogenic | 0.9411 | pathogenic | -1.492 | Destabilizing | 0.982 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/D | 0.9745 | likely_pathogenic | 0.9794 | pathogenic | -2.042 | Highly Destabilizing | 0.826 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/E | 0.9179 | likely_pathogenic | 0.9291 | pathogenic | -2.051 | Highly Destabilizing | 0.781 | D | 0.711 | prob.delet. | D | 0.646054848 | None | None | N |
V/F | 0.5516 | ambiguous | 0.5632 | ambiguous | -1.354 | Destabilizing | 0.7 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/G | 0.789 | likely_pathogenic | 0.8059 | pathogenic | -1.646 | Destabilizing | 0.781 | D | 0.71 | prob.delet. | D | 0.646054848 | None | None | N |
V/H | 0.9685 | likely_pathogenic | 0.9757 | pathogenic | -1.166 | Destabilizing | 0.982 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/I | 0.08 | likely_benign | 0.0982 | benign | -0.756 | Destabilizing | 0.002 | N | 0.481 | neutral | None | None | None | None | N |
V/K | 0.9248 | likely_pathogenic | 0.9426 | pathogenic | -1.087 | Destabilizing | 0.826 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/L | 0.4375 | ambiguous | 0.4874 | ambiguous | -0.756 | Destabilizing | 0.034 | N | 0.63 | neutral | D | 0.583997241 | None | None | N |
V/M | 0.3749 | ambiguous | 0.438 | ambiguous | -0.765 | Destabilizing | 0.638 | D | 0.724 | prob.delet. | D | 0.620113127 | None | None | N |
V/N | 0.9021 | likely_pathogenic | 0.9189 | pathogenic | -1.082 | Destabilizing | 0.935 | D | 0.745 | deleterious | None | None | None | None | N |
V/P | 0.931 | likely_pathogenic | 0.9358 | pathogenic | -0.934 | Destabilizing | 0.935 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/Q | 0.9045 | likely_pathogenic | 0.9173 | pathogenic | -1.348 | Destabilizing | 0.935 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/R | 0.8883 | likely_pathogenic | 0.907 | pathogenic | -0.608 | Destabilizing | 0.826 | D | 0.743 | deleterious | None | None | None | None | N |
V/S | 0.7788 | likely_pathogenic | 0.7954 | pathogenic | -1.521 | Destabilizing | 0.826 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/T | 0.651 | likely_pathogenic | 0.6887 | pathogenic | -1.43 | Destabilizing | 0.399 | N | 0.67 | neutral | None | None | None | None | N |
V/W | 0.9752 | likely_pathogenic | 0.9817 | pathogenic | -1.513 | Destabilizing | 0.982 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/Y | 0.9269 | likely_pathogenic | 0.9343 | pathogenic | -1.157 | Destabilizing | 0.826 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.