Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9027 | 27304;27305;27306 | chr2:178712946;178712945;178712944 | chr2:179577673;179577672;179577671 |
N2AB | 8710 | 26353;26354;26355 | chr2:178712946;178712945;178712944 | chr2:179577673;179577672;179577671 |
N2A | 7783 | 23572;23573;23574 | chr2:178712946;178712945;178712944 | chr2:179577673;179577672;179577671 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1356270449 | None | None | N | 0.276 | 0.204 | 0.386395597597 | gnomAD-4.0.0 | 9.58509E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25977E-05 | 0 | 0 |
P/T | rs2154296309 | None | 0.012 | N | 0.339 | 0.032 | 0.0401082797425 | gnomAD-4.0.0 | 1.36931E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04388E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.062 | likely_benign | 0.0521 | benign | -1.147 | Destabilizing | None | N | 0.109 | neutral | N | 0.486819382 | None | None | N |
P/C | 0.4453 | ambiguous | 0.38 | ambiguous | -0.462 | Destabilizing | 0.676 | D | 0.465 | neutral | None | None | None | None | N |
P/D | 0.2612 | likely_benign | 0.247 | benign | -1.0 | Destabilizing | None | N | 0.165 | neutral | None | None | None | None | N |
P/E | 0.201 | likely_benign | 0.1843 | benign | -1.042 | Destabilizing | 0.038 | N | 0.341 | neutral | None | None | None | None | N |
P/F | 0.3637 | ambiguous | 0.3245 | benign | -1.021 | Destabilizing | 0.12 | N | 0.512 | neutral | None | None | None | None | N |
P/G | 0.2264 | likely_benign | 0.1992 | benign | -1.407 | Destabilizing | 0.016 | N | 0.334 | neutral | None | None | None | None | N |
P/H | 0.1524 | likely_benign | 0.1504 | benign | -1.004 | Destabilizing | 0.295 | N | 0.447 | neutral | N | 0.457097693 | None | None | N |
P/I | 0.2737 | likely_benign | 0.2356 | benign | -0.551 | Destabilizing | 0.038 | N | 0.517 | neutral | None | None | None | None | N |
P/K | 0.2122 | likely_benign | 0.2035 | benign | -0.914 | Destabilizing | 0.038 | N | 0.352 | neutral | None | None | None | None | N |
P/L | 0.1293 | likely_benign | 0.1207 | benign | -0.551 | Destabilizing | None | N | 0.276 | neutral | N | 0.467947019 | None | None | N |
P/M | 0.2713 | likely_benign | 0.2251 | benign | -0.328 | Destabilizing | 0.214 | N | 0.46 | neutral | None | None | None | None | N |
P/N | 0.2339 | likely_benign | 0.2085 | benign | -0.528 | Destabilizing | 0.038 | N | 0.493 | neutral | None | None | None | None | N |
P/Q | 0.1299 | likely_benign | 0.1238 | benign | -0.737 | Destabilizing | 0.214 | N | 0.461 | neutral | None | None | None | None | N |
P/R | 0.1363 | likely_benign | 0.1412 | benign | -0.386 | Destabilizing | 0.171 | N | 0.519 | neutral | N | 0.479450693 | None | None | N |
P/S | 0.085 | likely_benign | 0.0784 | benign | -0.934 | Destabilizing | None | N | 0.106 | neutral | N | 0.416591293 | None | None | N |
P/T | 0.0898 | likely_benign | 0.0806 | benign | -0.876 | Destabilizing | 0.012 | N | 0.339 | neutral | N | 0.493398638 | None | None | N |
P/V | 0.1892 | likely_benign | 0.1571 | benign | -0.715 | Destabilizing | 0.038 | N | 0.398 | neutral | None | None | None | None | N |
P/W | 0.5303 | ambiguous | 0.5283 | ambiguous | -1.188 | Destabilizing | 0.864 | D | 0.541 | neutral | None | None | None | None | N |
P/Y | 0.3381 | likely_benign | 0.3091 | benign | -0.905 | Destabilizing | 0.356 | N | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.