Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9032 | 27319;27320;27321 | chr2:178712931;178712930;178712929 | chr2:179577658;179577657;179577656 |
N2AB | 8715 | 26368;26369;26370 | chr2:178712931;178712930;178712929 | chr2:179577658;179577657;179577656 |
N2A | 7788 | 23587;23588;23589 | chr2:178712931;178712930;178712929 | chr2:179577658;179577657;179577656 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.001 | N | 0.09 | 0.18 | 0.144782658237 | gnomAD-4.0.0 | 3.42281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0604 | likely_benign | 0.0616 | benign | -0.684 | Destabilizing | 0.139 | N | 0.184 | neutral | N | 0.363007524 | None | None | N |
T/C | 0.3278 | likely_benign | 0.322 | benign | -0.382 | Destabilizing | 0.981 | D | 0.273 | neutral | None | None | None | None | N |
T/D | 0.2912 | likely_benign | 0.3028 | benign | 0.133 | Stabilizing | 0.495 | N | 0.311 | neutral | None | None | None | None | N |
T/E | 0.1754 | likely_benign | 0.1969 | benign | 0.096 | Stabilizing | 0.329 | N | 0.332 | neutral | None | None | None | None | N |
T/F | 0.1996 | likely_benign | 0.2257 | benign | -0.952 | Destabilizing | 0.893 | D | 0.358 | neutral | None | None | None | None | N |
T/G | 0.2145 | likely_benign | 0.2124 | benign | -0.888 | Destabilizing | 0.329 | N | 0.319 | neutral | None | None | None | None | N |
T/H | 0.1853 | likely_benign | 0.1968 | benign | -1.18 | Destabilizing | 0.944 | D | 0.293 | neutral | None | None | None | None | N |
T/I | 0.109 | likely_benign | 0.1195 | benign | -0.25 | Destabilizing | 0.473 | N | 0.341 | neutral | N | 0.413687061 | None | None | N |
T/K | 0.147 | likely_benign | 0.1637 | benign | -0.523 | Destabilizing | 0.329 | N | 0.295 | neutral | None | None | None | None | N |
T/L | 0.0773 | likely_benign | 0.0809 | benign | -0.25 | Destabilizing | 0.329 | N | 0.303 | neutral | None | None | None | None | N |
T/M | 0.0753 | likely_benign | 0.0791 | benign | 0.031 | Stabilizing | 0.085 | N | 0.182 | neutral | None | None | None | None | N |
T/N | 0.1096 | likely_benign | 0.1121 | benign | -0.365 | Destabilizing | 0.642 | D | 0.199 | neutral | N | 0.469407058 | None | None | N |
T/P | 0.062 | likely_benign | 0.0627 | benign | -0.364 | Destabilizing | 0.001 | N | 0.09 | neutral | N | 0.325414715 | None | None | N |
T/Q | 0.153 | likely_benign | 0.1633 | benign | -0.576 | Destabilizing | 0.085 | N | 0.148 | neutral | None | None | None | None | N |
T/R | 0.1084 | likely_benign | 0.1253 | benign | -0.269 | Destabilizing | 0.704 | D | 0.341 | neutral | None | None | None | None | N |
T/S | 0.0897 | likely_benign | 0.0898 | benign | -0.661 | Destabilizing | 0.01 | N | 0.097 | neutral | N | 0.403702141 | None | None | N |
T/V | 0.1029 | likely_benign | 0.1105 | benign | -0.364 | Destabilizing | 0.329 | N | 0.202 | neutral | None | None | None | None | N |
T/W | 0.4671 | ambiguous | 0.5025 | ambiguous | -0.878 | Destabilizing | 0.995 | D | 0.293 | neutral | None | None | None | None | N |
T/Y | 0.2044 | likely_benign | 0.2362 | benign | -0.633 | Destabilizing | 0.981 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.