Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9036 | 27331;27332;27333 | chr2:178712919;178712918;178712917 | chr2:179577646;179577645;179577644 |
N2AB | 8719 | 26380;26381;26382 | chr2:178712919;178712918;178712917 | chr2:179577646;179577645;179577644 |
N2A | 7792 | 23599;23600;23601 | chr2:178712919;178712918;178712917 | chr2:179577646;179577645;179577644 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.939 | N | 0.542 | 0.203 | 0.518697010188 | gnomAD-4.0.0 | 1.59279E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86035E-06 | 0 | 0 |
V/L | rs2076875576 | None | 0.046 | N | 0.249 | 0.123 | 0.31077124679 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs2076875576 | None | 0.046 | N | 0.249 | 0.123 | 0.31077124679 | gnomAD-4.0.0 | 6.57039E-06 | None | None | None | None | N | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3144 | likely_benign | 0.3866 | ambiguous | -2.042 | Highly Destabilizing | 0.939 | D | 0.542 | neutral | N | 0.510293675 | None | None | N |
V/C | 0.8315 | likely_pathogenic | 0.8593 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/D | 0.885 | likely_pathogenic | 0.9498 | pathogenic | -2.388 | Highly Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
V/E | 0.784 | likely_pathogenic | 0.8773 | pathogenic | -2.174 | Highly Destabilizing | 0.997 | D | 0.771 | deleterious | D | 0.534713088 | None | None | N |
V/F | 0.3598 | ambiguous | 0.4222 | ambiguous | -1.271 | Destabilizing | 0.986 | D | 0.777 | deleterious | None | None | None | None | N |
V/G | 0.5704 | likely_pathogenic | 0.6963 | pathogenic | -2.572 | Highly Destabilizing | 0.997 | D | 0.811 | deleterious | N | 0.502783766 | None | None | N |
V/H | 0.9076 | likely_pathogenic | 0.9481 | pathogenic | -2.183 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
V/I | 0.0791 | likely_benign | 0.0752 | benign | -0.571 | Destabilizing | 0.046 | N | 0.245 | neutral | N | 0.50036747 | None | None | N |
V/K | 0.7878 | likely_pathogenic | 0.8767 | pathogenic | -1.757 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
V/L | 0.2896 | likely_benign | 0.2899 | benign | -0.571 | Destabilizing | 0.046 | N | 0.249 | neutral | N | 0.512448546 | None | None | N |
V/M | 0.2141 | likely_benign | 0.2286 | benign | -0.553 | Destabilizing | 0.986 | D | 0.67 | neutral | None | None | None | None | N |
V/N | 0.7933 | likely_pathogenic | 0.8879 | pathogenic | -2.032 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.9776 | likely_pathogenic | 0.9883 | pathogenic | -1.034 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
V/Q | 0.7764 | likely_pathogenic | 0.8622 | pathogenic | -1.884 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
V/R | 0.7289 | likely_pathogenic | 0.8427 | pathogenic | -1.577 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.6184 | likely_pathogenic | 0.7433 | pathogenic | -2.675 | Highly Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
V/T | 0.4122 | ambiguous | 0.5043 | ambiguous | -2.303 | Highly Destabilizing | 0.953 | D | 0.617 | neutral | None | None | None | None | N |
V/W | 0.9437 | likely_pathogenic | 0.9632 | pathogenic | -1.696 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
V/Y | 0.799 | likely_pathogenic | 0.8635 | pathogenic | -1.315 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.