Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9038 | 27337;27338;27339 | chr2:178712913;178712912;178712911 | chr2:179577640;179577639;179577638 |
N2AB | 8721 | 26386;26387;26388 | chr2:178712913;178712912;178712911 | chr2:179577640;179577639;179577638 |
N2A | 7794 | 23605;23606;23607 | chr2:178712913;178712912;178712911 | chr2:179577640;179577639;179577638 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 0.248 | D | 0.559 | 0.687 | 0.79156486764 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.967 | likely_pathogenic | 0.982 | pathogenic | -2.192 | Highly Destabilizing | 0.97 | D | 0.79 | deleterious | None | None | None | None | N |
F/C | 0.869 | likely_pathogenic | 0.9113 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.62866573 | None | None | N |
F/D | 0.9985 | likely_pathogenic | 0.9994 | pathogenic | -3.174 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
F/E | 0.9973 | likely_pathogenic | 0.9989 | pathogenic | -2.914 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
F/G | 0.9912 | likely_pathogenic | 0.9954 | pathogenic | -2.674 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
F/H | 0.9823 | likely_pathogenic | 0.9906 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
F/I | 0.5043 | ambiguous | 0.6097 | pathogenic | -0.604 | Destabilizing | 0.925 | D | 0.667 | neutral | D | 0.541034027 | None | None | N |
F/K | 0.9968 | likely_pathogenic | 0.9987 | pathogenic | -1.869 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
F/L | 0.8439 | likely_pathogenic | 0.861 | pathogenic | -0.604 | Destabilizing | 0.071 | N | 0.333 | neutral | N | 0.451633026 | None | None | N |
F/M | 0.7221 | likely_pathogenic | 0.7769 | pathogenic | -0.546 | Destabilizing | 0.991 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/N | 0.9928 | likely_pathogenic | 0.9964 | pathogenic | -2.603 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
F/P | 0.9995 | likely_pathogenic | 0.9998 | pathogenic | -1.149 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
F/Q | 0.994 | likely_pathogenic | 0.9973 | pathogenic | -2.307 | Highly Destabilizing | 0.999 | D | 0.904 | deleterious | None | None | None | None | N |
F/R | 0.991 | likely_pathogenic | 0.9958 | pathogenic | -1.963 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
F/S | 0.9763 | likely_pathogenic | 0.9897 | pathogenic | -3.02 | Highly Destabilizing | 0.994 | D | 0.837 | deleterious | D | 0.62866573 | None | None | N |
F/T | 0.983 | likely_pathogenic | 0.9918 | pathogenic | -2.622 | Highly Destabilizing | 0.97 | D | 0.823 | deleterious | None | None | None | None | N |
F/V | 0.5593 | ambiguous | 0.6535 | pathogenic | -1.149 | Destabilizing | 0.248 | N | 0.559 | neutral | D | 0.52352586 | None | None | N |
F/W | 0.8765 | likely_pathogenic | 0.9143 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
F/Y | 0.5709 | likely_pathogenic | 0.6095 | pathogenic | -0.53 | Destabilizing | 0.993 | D | 0.637 | neutral | D | 0.580173678 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.