Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9039 | 27340;27341;27342 | chr2:178712910;178712909;178712908 | chr2:179577637;179577636;179577635 |
N2AB | 8722 | 26389;26390;26391 | chr2:178712910;178712909;178712908 | chr2:179577637;179577636;179577635 |
N2A | 7795 | 23608;23609;23610 | chr2:178712910;178712909;178712908 | chr2:179577637;179577636;179577635 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1560585408 | None | 0.023 | N | 0.371 | 0.34 | 0.47737504017 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85997E-06 | 0 | 0 |
T/R | None | None | 0.642 | D | 0.565 | 0.281 | 0.586816528483 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85997E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.101 | likely_benign | 0.11 | benign | -1.097 | Destabilizing | 0.002 | N | 0.244 | neutral | D | 0.533347546 | None | None | N |
T/C | 0.484 | ambiguous | 0.5119 | ambiguous | -0.825 | Destabilizing | 0.995 | D | 0.57 | neutral | None | None | None | None | N |
T/D | 0.5163 | ambiguous | 0.5835 | pathogenic | -0.937 | Destabilizing | 0.543 | D | 0.502 | neutral | None | None | None | None | N |
T/E | 0.3215 | likely_benign | 0.3867 | ambiguous | -0.867 | Destabilizing | 0.031 | N | 0.309 | neutral | None | None | None | None | N |
T/F | 0.2495 | likely_benign | 0.2886 | benign | -0.944 | Destabilizing | 0.944 | D | 0.619 | neutral | None | None | None | None | N |
T/G | 0.3543 | ambiguous | 0.383 | ambiguous | -1.423 | Destabilizing | 0.329 | N | 0.509 | neutral | None | None | None | None | N |
T/H | 0.2075 | likely_benign | 0.226 | benign | -1.615 | Destabilizing | 0.944 | D | 0.625 | neutral | None | None | None | None | N |
T/I | 0.1886 | likely_benign | 0.2183 | benign | -0.293 | Destabilizing | 0.023 | N | 0.371 | neutral | N | 0.500597942 | None | None | N |
T/K | 0.1475 | likely_benign | 0.1745 | benign | -0.911 | Destabilizing | 0.642 | D | 0.492 | neutral | N | 0.510027969 | None | None | N |
T/L | 0.1174 | likely_benign | 0.1315 | benign | -0.293 | Destabilizing | 0.329 | N | 0.448 | neutral | None | None | None | None | N |
T/M | 0.1027 | likely_benign | 0.108 | benign | -0.04 | Destabilizing | 0.944 | D | 0.574 | neutral | None | None | None | None | N |
T/N | 0.1785 | likely_benign | 0.192 | benign | -1.108 | Destabilizing | 0.031 | N | 0.367 | neutral | None | None | None | None | N |
T/P | 0.242 | likely_benign | 0.3073 | benign | -0.529 | Destabilizing | 0.927 | D | 0.569 | neutral | N | 0.490545083 | None | None | N |
T/Q | 0.1951 | likely_benign | 0.217 | benign | -1.197 | Destabilizing | 0.893 | D | 0.571 | neutral | None | None | None | None | N |
T/R | 0.1067 | likely_benign | 0.1259 | benign | -0.742 | Destabilizing | 0.642 | D | 0.565 | neutral | D | 0.530192597 | None | None | N |
T/S | 0.1197 | likely_benign | 0.1219 | benign | -1.376 | Destabilizing | 0.065 | N | 0.261 | neutral | N | 0.506795663 | None | None | N |
T/V | 0.1706 | likely_benign | 0.1873 | benign | -0.529 | Destabilizing | 0.329 | N | 0.451 | neutral | None | None | None | None | N |
T/W | 0.5585 | ambiguous | 0.6269 | pathogenic | -0.9 | Destabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | N |
T/Y | 0.2723 | likely_benign | 0.3278 | benign | -0.647 | Destabilizing | 0.981 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.