Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9041 | 27346;27347;27348 | chr2:178712904;178712903;178712902 | chr2:179577631;179577630;179577629 |
N2AB | 8724 | 26395;26396;26397 | chr2:178712904;178712903;178712902 | chr2:179577631;179577630;179577629 |
N2A | 7797 | 23614;23615;23616 | chr2:178712904;178712903;178712902 | chr2:179577631;179577630;179577629 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs890920556 | None | 0.11 | N | 0.243 | 0.03 | 0.369867359543 | gnomAD-4.0.0 | 1.3689E-06 | None | None | None | None | N | None | 5.97729E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1395755933 | None | 0.001 | N | 0.154 | 0.087 | 0.363356657567 | gnomAD-4.0.0 | 4.10656E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39764E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1359 | likely_benign | 0.1884 | benign | -1.554 | Destabilizing | 0.061 | N | 0.284 | neutral | None | None | None | None | N |
I/C | 0.6095 | likely_pathogenic | 0.7191 | pathogenic | -1.135 | Destabilizing | 0.94 | D | 0.499 | neutral | None | None | None | None | N |
I/D | 0.5161 | ambiguous | 0.6563 | pathogenic | -0.7 | Destabilizing | 0.418 | N | 0.571 | neutral | None | None | None | None | N |
I/E | 0.3295 | likely_benign | 0.4212 | ambiguous | -0.7 | Destabilizing | 0.418 | N | 0.544 | neutral | None | None | None | None | N |
I/F | 0.1104 | likely_benign | 0.1359 | benign | -1.156 | Destabilizing | 0.213 | N | 0.449 | neutral | N | 0.507065021 | None | None | N |
I/G | 0.4962 | ambiguous | 0.6347 | pathogenic | -1.856 | Destabilizing | 0.418 | N | 0.52 | neutral | None | None | None | None | N |
I/H | 0.2953 | likely_benign | 0.3817 | ambiguous | -1.029 | Destabilizing | 0.94 | D | 0.536 | neutral | None | None | None | None | N |
I/K | 0.1907 | likely_benign | 0.2468 | benign | -0.859 | Destabilizing | 0.01 | N | 0.373 | neutral | None | None | None | None | N |
I/L | 0.0902 | likely_benign | 0.112 | benign | -0.805 | Destabilizing | None | N | 0.135 | neutral | N | 0.478531626 | None | None | N |
I/M | 0.082 | likely_benign | 0.0943 | benign | -0.714 | Destabilizing | 0.11 | N | 0.243 | neutral | N | 0.477262189 | None | None | N |
I/N | 0.2223 | likely_benign | 0.3035 | benign | -0.69 | Destabilizing | 0.351 | N | 0.586 | neutral | N | 0.474528529 | None | None | N |
I/P | 0.6967 | likely_pathogenic | 0.8194 | pathogenic | -1.023 | Destabilizing | 0.94 | D | 0.595 | neutral | None | None | None | None | N |
I/Q | 0.2723 | likely_benign | 0.3507 | ambiguous | -0.885 | Destabilizing | 0.716 | D | 0.593 | neutral | None | None | None | None | N |
I/R | 0.1259 | likely_benign | 0.1706 | benign | -0.337 | Destabilizing | 0.264 | N | 0.583 | neutral | None | None | None | None | N |
I/S | 0.1795 | likely_benign | 0.2391 | benign | -1.393 | Destabilizing | 0.021 | N | 0.325 | neutral | N | 0.446611209 | None | None | N |
I/T | 0.0868 | likely_benign | 0.1118 | benign | -1.275 | Destabilizing | 0.007 | N | 0.191 | neutral | N | 0.4273693 | None | None | N |
I/V | 0.0621 | likely_benign | 0.0652 | benign | -1.023 | Destabilizing | 0.001 | N | 0.154 | neutral | N | 0.397185253 | None | None | N |
I/W | 0.5493 | ambiguous | 0.6824 | pathogenic | -1.16 | Destabilizing | 0.983 | D | 0.557 | neutral | None | None | None | None | N |
I/Y | 0.3567 | ambiguous | 0.4377 | ambiguous | -0.914 | Destabilizing | 0.836 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.