Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9042 | 27349;27350;27351 | chr2:178712901;178712900;178712899 | chr2:179577628;179577627;179577626 |
N2AB | 8725 | 26398;26399;26400 | chr2:178712901;178712900;178712899 | chr2:179577628;179577627;179577626 |
N2A | 7798 | 23617;23618;23619 | chr2:178712901;178712900;178712899 | chr2:179577628;179577627;179577626 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs766095051 | 0.321 | 0.001 | N | 0.238 | 0.169 | None | gnomAD-2.1.1 | 4.3E-05 | None | None | None | None | N | None | 4.14E-05 | 5.69E-05 | None | 0 | 0 | None | 1.64322E-04 | None | 0 | 2.36E-05 | 1.41363E-04 |
V/I | rs766095051 | 0.321 | 0.001 | N | 0.238 | 0.169 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 2.06868E-04 | 0 |
V/I | rs766095051 | 0.321 | 0.001 | N | 0.238 | 0.169 | None | gnomAD-4.0.0 | 2.60334E-05 | None | None | None | None | N | None | 3.99851E-05 | 8.34307E-05 | None | 0 | 0 | None | 0 | 0 | 1.44118E-05 | 1.7589E-04 | 1.60113E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5104 | ambiguous | 0.6018 | pathogenic | -1.552 | Destabilizing | 0.002 | N | 0.291 | neutral | N | 0.48923977 | None | None | N |
V/C | 0.8083 | likely_pathogenic | 0.8723 | pathogenic | -1.112 | Destabilizing | 0.935 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/D | 0.9619 | likely_pathogenic | 0.9824 | pathogenic | -1.215 | Destabilizing | 0.555 | D | 0.811 | deleterious | None | None | None | None | N |
V/E | 0.9094 | likely_pathogenic | 0.9535 | pathogenic | -1.0 | Destabilizing | 0.484 | N | 0.778 | deleterious | D | 0.582050638 | None | None | N |
V/F | 0.1706 | likely_benign | 0.2747 | benign | -0.793 | Destabilizing | 0.001 | N | 0.443 | neutral | None | None | None | None | N |
V/G | 0.6993 | likely_pathogenic | 0.7977 | pathogenic | -2.085 | Highly Destabilizing | 0.117 | N | 0.767 | deleterious | D | 0.561620148 | None | None | N |
V/H | 0.9241 | likely_pathogenic | 0.9663 | pathogenic | -1.785 | Destabilizing | 0.935 | D | 0.789 | deleterious | None | None | None | None | N |
V/I | 0.0598 | likely_benign | 0.0596 | benign | -0.083 | Destabilizing | 0.001 | N | 0.238 | neutral | N | 0.484119165 | None | None | N |
V/K | 0.9165 | likely_pathogenic | 0.9605 | pathogenic | -0.983 | Destabilizing | 0.555 | D | 0.78 | deleterious | None | None | None | None | N |
V/L | 0.1119 | likely_benign | 0.1379 | benign | -0.083 | Destabilizing | None | N | 0.271 | neutral | D | 0.568391526 | None | None | N |
V/M | 0.1669 | likely_benign | 0.2066 | benign | -0.253 | Destabilizing | 0.38 | N | 0.661 | neutral | None | None | None | None | N |
V/N | 0.882 | likely_pathogenic | 0.9378 | pathogenic | -1.209 | Destabilizing | 0.791 | D | 0.813 | deleterious | None | None | None | None | N |
V/P | 0.8899 | likely_pathogenic | 0.9382 | pathogenic | -0.542 | Destabilizing | 0.791 | D | 0.792 | deleterious | None | None | None | None | N |
V/Q | 0.8688 | likely_pathogenic | 0.9313 | pathogenic | -1.001 | Destabilizing | 0.791 | D | 0.786 | deleterious | None | None | None | None | N |
V/R | 0.8574 | likely_pathogenic | 0.9314 | pathogenic | -1.032 | Destabilizing | 0.555 | D | 0.814 | deleterious | None | None | None | None | N |
V/S | 0.7397 | likely_pathogenic | 0.8244 | pathogenic | -1.967 | Destabilizing | 0.081 | N | 0.747 | deleterious | None | None | None | None | N |
V/T | 0.6199 | likely_pathogenic | 0.7062 | pathogenic | -1.593 | Destabilizing | 0.149 | N | 0.646 | neutral | None | None | None | None | N |
V/W | 0.8536 | likely_pathogenic | 0.9365 | pathogenic | -1.196 | Destabilizing | 0.935 | D | 0.777 | deleterious | None | None | None | None | N |
V/Y | 0.7176 | likely_pathogenic | 0.8554 | pathogenic | -0.778 | Destabilizing | 0.235 | N | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.