Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9045 | 27358;27359;27360 | chr2:178712892;178712891;178712890 | chr2:179577619;179577618;179577617 |
N2AB | 8728 | 26407;26408;26409 | chr2:178712892;178712891;178712890 | chr2:179577619;179577618;179577617 |
N2A | 7801 | 23626;23627;23628 | chr2:178712892;178712891;178712890 | chr2:179577619;179577618;179577617 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.001 | N | 0.183 | 0.085 | 0.229924730088 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85896E-06 | 0 | 0 |
T/K | None | None | 0.062 | N | 0.392 | 0.212 | 0.37568098594 | gnomAD-4.0.0 | 6.8436E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99552E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1268 | likely_benign | 0.1509 | benign | -0.372 | Destabilizing | 0.001 | N | 0.183 | neutral | N | 0.519012811 | None | None | I |
T/C | 0.5901 | likely_pathogenic | 0.6996 | pathogenic | -0.399 | Destabilizing | 0.824 | D | 0.457 | neutral | None | None | None | None | I |
T/D | 0.4392 | ambiguous | 0.4713 | ambiguous | 0.095 | Stabilizing | 0.081 | N | 0.453 | neutral | None | None | None | None | I |
T/E | 0.3945 | ambiguous | 0.454 | ambiguous | 0.056 | Stabilizing | 0.081 | N | 0.39 | neutral | None | None | None | None | I |
T/F | 0.2442 | likely_benign | 0.3128 | benign | -0.749 | Destabilizing | 0.555 | D | 0.581 | neutral | None | None | None | None | I |
T/G | 0.3766 | ambiguous | 0.4398 | ambiguous | -0.538 | Destabilizing | 0.035 | N | 0.517 | neutral | None | None | None | None | I |
T/H | 0.2931 | likely_benign | 0.3293 | benign | -0.659 | Destabilizing | 0.824 | D | 0.571 | neutral | None | None | None | None | I |
T/I | 0.2599 | likely_benign | 0.325 | benign | -0.044 | Destabilizing | 0.317 | N | 0.436 | neutral | N | 0.484188754 | None | None | I |
T/K | 0.275 | likely_benign | 0.3295 | benign | -0.432 | Destabilizing | 0.062 | N | 0.392 | neutral | N | 0.485768462 | None | None | I |
T/L | 0.1515 | likely_benign | 0.1757 | benign | -0.044 | Destabilizing | 0.149 | N | 0.386 | neutral | None | None | None | None | I |
T/M | 0.1052 | likely_benign | 0.1188 | benign | -0.171 | Destabilizing | 0.791 | D | 0.459 | neutral | None | None | None | None | I |
T/N | 0.1477 | likely_benign | 0.1631 | benign | -0.296 | Destabilizing | 0.081 | N | 0.395 | neutral | None | None | None | None | I |
T/P | 0.339 | likely_benign | 0.4038 | ambiguous | -0.124 | Destabilizing | 0.317 | N | 0.446 | neutral | N | 0.513902804 | None | None | I |
T/Q | 0.2809 | likely_benign | 0.3289 | benign | -0.429 | Destabilizing | 0.38 | N | 0.467 | neutral | None | None | None | None | I |
T/R | 0.2257 | likely_benign | 0.2754 | benign | -0.145 | Destabilizing | 0.317 | N | 0.446 | neutral | D | 0.526170857 | None | None | I |
T/S | 0.0956 | likely_benign | 0.0996 | benign | -0.496 | Destabilizing | None | N | 0.189 | neutral | N | 0.436685003 | None | None | I |
T/V | 0.213 | likely_benign | 0.2643 | benign | -0.124 | Destabilizing | 0.149 | N | 0.329 | neutral | None | None | None | None | I |
T/W | 0.5827 | likely_pathogenic | 0.6692 | pathogenic | -0.805 | Destabilizing | 0.935 | D | 0.634 | neutral | None | None | None | None | I |
T/Y | 0.288 | likely_benign | 0.354 | ambiguous | -0.508 | Destabilizing | 0.555 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.