Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9051 | 27376;27377;27378 | chr2:178712874;178712873;178712872 | chr2:179577601;179577600;179577599 |
N2AB | 8734 | 26425;26426;26427 | chr2:178712874;178712873;178712872 | chr2:179577601;179577600;179577599 |
N2A | 7807 | 23644;23645;23646 | chr2:178712874;178712873;178712872 | chr2:179577601;179577600;179577599 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1159097738 | 0.048 | 0.473 | N | 0.516 | 0.338 | 0.3085936734 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
S/R | rs1159097738 | 0.048 | 0.473 | N | 0.516 | 0.338 | 0.3085936734 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99517E-07 | 1.15972E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0819 | likely_benign | 0.0872 | benign | -0.571 | Destabilizing | 0.003 | N | 0.188 | neutral | None | None | None | None | N |
S/C | 0.1188 | likely_benign | 0.1404 | benign | -0.234 | Destabilizing | 0.975 | D | 0.547 | neutral | N | 0.517896184 | None | None | N |
S/D | 0.2611 | likely_benign | 0.3185 | benign | 0.089 | Stabilizing | 0.704 | D | 0.453 | neutral | None | None | None | None | N |
S/E | 0.3148 | likely_benign | 0.3882 | ambiguous | 0.161 | Stabilizing | 0.329 | N | 0.43 | neutral | None | None | None | None | N |
S/F | 0.1641 | likely_benign | 0.1859 | benign | -0.639 | Destabilizing | 0.981 | D | 0.555 | neutral | None | None | None | None | N |
S/G | 0.0834 | likely_benign | 0.0922 | benign | -0.878 | Destabilizing | 0.27 | N | 0.415 | neutral | D | 0.539065584 | None | None | N |
S/H | 0.1444 | likely_benign | 0.1726 | benign | -1.177 | Destabilizing | 0.981 | D | 0.556 | neutral | None | None | None | None | N |
S/I | 0.1127 | likely_benign | 0.1388 | benign | 0.154 | Stabilizing | 0.642 | D | 0.569 | neutral | N | 0.485809889 | None | None | N |
S/K | 0.217 | likely_benign | 0.2814 | benign | -0.206 | Destabilizing | 0.001 | N | 0.192 | neutral | None | None | None | None | N |
S/L | 0.0988 | likely_benign | 0.1096 | benign | 0.154 | Stabilizing | 0.495 | N | 0.505 | neutral | None | None | None | None | N |
S/M | 0.1675 | likely_benign | 0.1908 | benign | 0.117 | Stabilizing | 0.981 | D | 0.555 | neutral | None | None | None | None | N |
S/N | 0.0903 | likely_benign | 0.1034 | benign | -0.381 | Destabilizing | 0.642 | D | 0.459 | neutral | D | 0.53090746 | None | None | N |
S/P | 0.7984 | likely_pathogenic | 0.8519 | pathogenic | -0.052 | Destabilizing | 0.828 | D | 0.537 | neutral | None | None | None | None | N |
S/Q | 0.2265 | likely_benign | 0.2757 | benign | -0.331 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
S/R | 0.1715 | likely_benign | 0.2209 | benign | -0.298 | Destabilizing | 0.473 | N | 0.516 | neutral | N | 0.45864193 | None | None | N |
S/T | 0.0715 | likely_benign | 0.0751 | benign | -0.339 | Destabilizing | 0.01 | N | 0.214 | neutral | N | 0.436418432 | None | None | N |
S/V | 0.1388 | likely_benign | 0.1657 | benign | -0.052 | Destabilizing | 0.329 | N | 0.503 | neutral | None | None | None | None | N |
S/W | 0.2577 | likely_benign | 0.3005 | benign | -0.73 | Destabilizing | 0.995 | D | 0.611 | neutral | None | None | None | None | N |
S/Y | 0.1285 | likely_benign | 0.1527 | benign | -0.366 | Destabilizing | 0.981 | D | 0.55 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.