Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9054 | 27385;27386;27387 | chr2:178712865;178712864;178712863 | chr2:179577592;179577591;179577590 |
N2AB | 8737 | 26434;26435;26436 | chr2:178712865;178712864;178712863 | chr2:179577592;179577591;179577590 |
N2A | 7810 | 23653;23654;23655 | chr2:178712865;178712864;178712863 | chr2:179577592;179577591;179577590 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.046 | N | 0.226 | 0.077 | 0.17258766438 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7439 | likely_pathogenic | 0.7802 | pathogenic | -0.9 | Destabilizing | 0.953 | D | 0.529 | neutral | None | None | None | None | N |
K/C | 0.7973 | likely_pathogenic | 0.8097 | pathogenic | -0.902 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
K/D | 0.9301 | likely_pathogenic | 0.9432 | pathogenic | 0.298 | Stabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/E | 0.4865 | ambiguous | 0.5299 | ambiguous | 0.417 | Stabilizing | 0.939 | D | 0.451 | neutral | D | 0.53553969 | None | None | N |
K/F | 0.8679 | likely_pathogenic | 0.8681 | pathogenic | -0.815 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
K/G | 0.8623 | likely_pathogenic | 0.8768 | pathogenic | -1.23 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/H | 0.3954 | ambiguous | 0.3992 | ambiguous | -1.56 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
K/I | 0.5661 | likely_pathogenic | 0.6277 | pathogenic | -0.05 | Destabilizing | 0.991 | D | 0.807 | deleterious | N | 0.511395047 | None | None | N |
K/L | 0.5358 | ambiguous | 0.5809 | pathogenic | -0.05 | Destabilizing | 0.986 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/M | 0.4288 | ambiguous | 0.476 | ambiguous | -0.132 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
K/N | 0.8203 | likely_pathogenic | 0.8472 | pathogenic | -0.355 | Destabilizing | 0.982 | D | 0.609 | neutral | N | 0.503192294 | None | None | N |
K/P | 0.9776 | likely_pathogenic | 0.9795 | pathogenic | -0.306 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | N |
K/Q | 0.2181 | likely_benign | 0.2299 | benign | -0.42 | Destabilizing | 0.982 | D | 0.593 | neutral | N | 0.498570711 | None | None | N |
K/R | 0.0707 | likely_benign | 0.0707 | benign | -0.433 | Destabilizing | 0.046 | N | 0.226 | neutral | N | 0.449960079 | None | None | N |
K/S | 0.7888 | likely_pathogenic | 0.8167 | pathogenic | -1.19 | Destabilizing | 0.953 | D | 0.539 | neutral | None | None | None | None | N |
K/T | 0.6001 | likely_pathogenic | 0.662 | pathogenic | -0.851 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | D | 0.535032711 | None | None | N |
K/V | 0.5851 | likely_pathogenic | 0.6445 | pathogenic | -0.306 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
K/W | 0.7854 | likely_pathogenic | 0.783 | pathogenic | -0.614 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
K/Y | 0.7206 | likely_pathogenic | 0.7308 | pathogenic | -0.307 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.