Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9058 | 27397;27398;27399 | chr2:178712853;178712852;178712851 | chr2:179577580;179577579;179577578 |
N2AB | 8741 | 26446;26447;26448 | chr2:178712853;178712852;178712851 | chr2:179577580;179577579;179577578 |
N2A | 7814 | 23665;23666;23667 | chr2:178712853;178712852;178712851 | chr2:179577580;179577579;179577578 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | N | 0.647 | 0.589 | 0.672538118423 | gnomAD-4.0.0 | 6.84235E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99481E-07 | 0 | 0 |
E/Q | rs2154296273 | None | 0.916 | N | 0.287 | 0.239 | 0.3691244813 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1599 | likely_benign | 0.1633 | benign | -0.667 | Destabilizing | 0.992 | D | 0.634 | neutral | N | 0.498823515 | None | None | N |
E/C | 0.8604 | likely_pathogenic | 0.8725 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/D | 0.3403 | ambiguous | 0.3541 | ambiguous | -0.438 | Destabilizing | 0.992 | D | 0.487 | neutral | N | 0.49327688 | None | None | N |
E/F | 0.7289 | likely_pathogenic | 0.7515 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/G | 0.2668 | likely_benign | 0.282 | benign | -0.93 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.520183454 | None | None | N |
E/H | 0.481 | ambiguous | 0.5095 | ambiguous | 0.173 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.2694 | likely_benign | 0.277 | benign | 0.024 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/K | 0.0936 | likely_benign | 0.0992 | benign | 0.182 | Stabilizing | 0.984 | D | 0.573 | neutral | N | 0.494010895 | None | None | N |
E/L | 0.3194 | likely_benign | 0.3237 | benign | 0.024 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/M | 0.3651 | ambiguous | 0.3769 | ambiguous | 0.097 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/N | 0.4072 | ambiguous | 0.4294 | ambiguous | -0.481 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/P | 0.3657 | ambiguous | 0.3918 | ambiguous | -0.187 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/Q | 0.1121 | likely_benign | 0.1172 | benign | -0.382 | Destabilizing | 0.916 | D | 0.287 | neutral | N | 0.491657492 | None | None | N |
E/R | 0.1796 | likely_benign | 0.1955 | benign | 0.54 | Stabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/S | 0.2774 | likely_benign | 0.296 | benign | -0.639 | Destabilizing | 0.994 | D | 0.639 | neutral | None | None | None | None | N |
E/T | 0.2668 | likely_benign | 0.2783 | benign | -0.404 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/V | 0.1663 | likely_benign | 0.1708 | benign | -0.187 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.487822831 | None | None | N |
E/W | 0.9139 | likely_pathogenic | 0.9258 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/Y | 0.6564 | likely_pathogenic | 0.6819 | pathogenic | 0.177 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.