Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9059 | 27400;27401;27402 | chr2:178712850;178712849;178712848 | chr2:179577577;179577576;179577575 |
N2AB | 8742 | 26449;26450;26451 | chr2:178712850;178712849;178712848 | chr2:179577577;179577576;179577575 |
N2A | 7815 | 23668;23669;23670 | chr2:178712850;178712849;178712848 | chr2:179577577;179577576;179577575 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs780110919 | -0.907 | 0.971 | D | 0.771 | 0.697 | 0.858135505271 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/R | rs780110919 | -0.907 | 0.971 | D | 0.771 | 0.697 | 0.858135505271 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
L/R | rs780110919 | -0.907 | 0.971 | D | 0.771 | 0.697 | 0.858135505271 | gnomAD-4.0.0 | 1.30136E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.77997E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5504 | ambiguous | 0.5772 | pathogenic | -2.102 | Highly Destabilizing | 0.86 | D | 0.479 | neutral | None | None | None | None | I |
L/C | 0.7856 | likely_pathogenic | 0.8128 | pathogenic | -1.162 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
L/D | 0.9545 | likely_pathogenic | 0.9665 | pathogenic | -2.262 | Highly Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | I |
L/E | 0.7972 | likely_pathogenic | 0.8388 | pathogenic | -2.037 | Highly Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | I |
L/F | 0.2553 | likely_benign | 0.2655 | benign | -1.242 | Destabilizing | 0.956 | D | 0.563 | neutral | None | None | None | None | I |
L/G | 0.8867 | likely_pathogenic | 0.9028 | pathogenic | -2.624 | Highly Destabilizing | 0.978 | D | 0.774 | deleterious | None | None | None | None | I |
L/H | 0.6642 | likely_pathogenic | 0.7194 | pathogenic | -2.044 | Highly Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
L/I | 0.0854 | likely_benign | 0.0813 | benign | -0.607 | Destabilizing | 0.014 | N | 0.277 | neutral | N | 0.48253751 | None | None | I |
L/K | 0.6992 | likely_pathogenic | 0.7626 | pathogenic | -1.512 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/M | 0.1531 | likely_benign | 0.1588 | benign | -0.457 | Destabilizing | 0.559 | D | 0.406 | neutral | None | None | None | None | I |
L/N | 0.862 | likely_pathogenic | 0.8899 | pathogenic | -1.849 | Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | I |
L/P | 0.857 | likely_pathogenic | 0.8686 | pathogenic | -1.085 | Destabilizing | 0.99 | D | 0.799 | deleterious | D | 0.525572867 | None | None | I |
L/Q | 0.5478 | ambiguous | 0.6129 | pathogenic | -1.708 | Destabilizing | 0.971 | D | 0.771 | deleterious | D | 0.533232643 | None | None | I |
L/R | 0.5657 | likely_pathogenic | 0.6371 | pathogenic | -1.295 | Destabilizing | 0.971 | D | 0.771 | deleterious | D | 0.542195865 | None | None | I |
L/S | 0.8102 | likely_pathogenic | 0.8439 | pathogenic | -2.517 | Highly Destabilizing | 0.978 | D | 0.714 | prob.delet. | None | None | None | None | I |
L/T | 0.5578 | ambiguous | 0.6111 | pathogenic | -2.146 | Highly Destabilizing | 0.956 | D | 0.629 | neutral | None | None | None | None | I |
L/V | 0.1115 | likely_benign | 0.1094 | benign | -1.085 | Destabilizing | 0.247 | N | 0.439 | neutral | N | 0.493030753 | None | None | I |
L/W | 0.4514 | ambiguous | 0.5054 | ambiguous | -1.631 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/Y | 0.592 | likely_pathogenic | 0.651 | pathogenic | -1.265 | Destabilizing | 0.978 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.