Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC905927400;27401;27402 chr2:178712850;178712849;178712848chr2:179577577;179577576;179577575
N2AB874226449;26450;26451 chr2:178712850;178712849;178712848chr2:179577577;179577576;179577575
N2A781523668;23669;23670 chr2:178712850;178712849;178712848chr2:179577577;179577576;179577575
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Ig-76
  • Domain position: 41
  • Structural Position: 58
  • Q(SASA): 0.2266
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R rs780110919 -0.907 0.971 D 0.771 0.697 0.858135505271 gnomAD-2.1.1 8.05E-06 None None None None I None 0 0 None 0 0 None 0 None 0 1.78E-05 0
L/R rs780110919 -0.907 0.971 D 0.771 0.697 0.858135505271 gnomAD-3.1.2 1.31E-05 None None None None I None 0 0 0 0 0 None 0 0 2.94E-05 0 0
L/R rs780110919 -0.907 0.971 D 0.771 0.697 0.858135505271 gnomAD-4.0.0 1.30136E-05 None None None None I None 0 0 None 0 0 None 0 0 1.77997E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.5504 ambiguous 0.5772 pathogenic -2.102 Highly Destabilizing 0.86 D 0.479 neutral None None None None I
L/C 0.7856 likely_pathogenic 0.8128 pathogenic -1.162 Destabilizing 0.998 D 0.685 prob.neutral None None None None I
L/D 0.9545 likely_pathogenic 0.9665 pathogenic -2.262 Highly Destabilizing 0.993 D 0.799 deleterious None None None None I
L/E 0.7972 likely_pathogenic 0.8388 pathogenic -2.037 Highly Destabilizing 0.993 D 0.791 deleterious None None None None I
L/F 0.2553 likely_benign 0.2655 benign -1.242 Destabilizing 0.956 D 0.563 neutral None None None None I
L/G 0.8867 likely_pathogenic 0.9028 pathogenic -2.624 Highly Destabilizing 0.978 D 0.774 deleterious None None None None I
L/H 0.6642 likely_pathogenic 0.7194 pathogenic -2.044 Highly Destabilizing 0.998 D 0.773 deleterious None None None None I
L/I 0.0854 likely_benign 0.0813 benign -0.607 Destabilizing 0.014 N 0.277 neutral N 0.48253751 None None I
L/K 0.6992 likely_pathogenic 0.7626 pathogenic -1.512 Destabilizing 0.978 D 0.739 prob.delet. None None None None I
L/M 0.1531 likely_benign 0.1588 benign -0.457 Destabilizing 0.559 D 0.406 neutral None None None None I
L/N 0.862 likely_pathogenic 0.8899 pathogenic -1.849 Destabilizing 0.993 D 0.797 deleterious None None None None I
L/P 0.857 likely_pathogenic 0.8686 pathogenic -1.085 Destabilizing 0.99 D 0.799 deleterious D 0.525572867 None None I
L/Q 0.5478 ambiguous 0.6129 pathogenic -1.708 Destabilizing 0.971 D 0.771 deleterious D 0.533232643 None None I
L/R 0.5657 likely_pathogenic 0.6371 pathogenic -1.295 Destabilizing 0.971 D 0.771 deleterious D 0.542195865 None None I
L/S 0.8102 likely_pathogenic 0.8439 pathogenic -2.517 Highly Destabilizing 0.978 D 0.714 prob.delet. None None None None I
L/T 0.5578 ambiguous 0.6111 pathogenic -2.146 Highly Destabilizing 0.956 D 0.629 neutral None None None None I
L/V 0.1115 likely_benign 0.1094 benign -1.085 Destabilizing 0.247 N 0.439 neutral N 0.493030753 None None I
L/W 0.4514 ambiguous 0.5054 ambiguous -1.631 Destabilizing 0.998 D 0.723 prob.delet. None None None None I
L/Y 0.592 likely_pathogenic 0.651 pathogenic -1.265 Destabilizing 0.978 D 0.707 prob.neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.