Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9060 | 27403;27404;27405 | chr2:178712847;178712846;178712845 | chr2:179577574;179577573;179577572 |
N2AB | 8743 | 26452;26453;26454 | chr2:178712847;178712846;178712845 | chr2:179577574;179577573;179577572 |
N2A | 7816 | 23671;23672;23673 | chr2:178712847;178712846;178712845 | chr2:179577574;179577573;179577572 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | D | 0.169 | 0.111 | 0.391775403332 | gnomAD-4.0.0 | 3.18274E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1162 | likely_benign | 0.1243 | benign | -0.396 | Destabilizing | None | N | 0.088 | neutral | N | 0.480915783 | None | None | I |
V/C | 0.6525 | likely_pathogenic | 0.6693 | pathogenic | -0.73 | Destabilizing | 0.676 | D | 0.348 | neutral | None | None | None | None | I |
V/D | 0.1728 | likely_benign | 0.2012 | benign | -0.319 | Destabilizing | 0.038 | N | 0.42 | neutral | None | None | None | None | I |
V/E | 0.1335 | likely_benign | 0.1485 | benign | -0.423 | Destabilizing | 0.001 | N | 0.237 | neutral | N | 0.47724076 | None | None | I |
V/F | 0.0928 | likely_benign | 0.0932 | benign | -0.626 | Destabilizing | 0.038 | N | 0.391 | neutral | None | None | None | None | I |
V/G | 0.1271 | likely_benign | 0.1458 | benign | -0.507 | Destabilizing | 0.029 | N | 0.418 | neutral | N | 0.501157769 | None | None | I |
V/H | 0.2767 | likely_benign | 0.2844 | benign | -0.051 | Destabilizing | 0.214 | N | 0.359 | neutral | None | None | None | None | I |
V/I | 0.0745 | likely_benign | 0.0716 | benign | -0.246 | Destabilizing | None | N | 0.169 | neutral | D | 0.525842783 | None | None | I |
V/K | 0.1446 | likely_benign | 0.1562 | benign | -0.455 | Destabilizing | 0.072 | N | 0.378 | neutral | None | None | None | None | I |
V/L | 0.0974 | likely_benign | 0.0993 | benign | -0.246 | Destabilizing | None | N | 0.081 | neutral | N | 0.462639454 | None | None | I |
V/M | 0.1095 | likely_benign | 0.111 | benign | -0.495 | Destabilizing | 0.214 | N | 0.315 | neutral | None | None | None | None | I |
V/N | 0.1557 | likely_benign | 0.1588 | benign | -0.252 | Destabilizing | 0.214 | N | 0.416 | neutral | None | None | None | None | I |
V/P | 0.2929 | likely_benign | 0.3166 | benign | -0.264 | Destabilizing | 0.214 | N | 0.391 | neutral | None | None | None | None | I |
V/Q | 0.1451 | likely_benign | 0.1544 | benign | -0.456 | Destabilizing | 0.214 | N | 0.384 | neutral | None | None | None | None | I |
V/R | 0.1324 | likely_benign | 0.146 | benign | 0.021 | Stabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | I |
V/S | 0.1205 | likely_benign | 0.1252 | benign | -0.582 | Destabilizing | 0.038 | N | 0.39 | neutral | None | None | None | None | I |
V/T | 0.1278 | likely_benign | 0.1265 | benign | -0.585 | Destabilizing | None | N | 0.081 | neutral | None | None | None | None | I |
V/W | 0.5323 | ambiguous | 0.5774 | pathogenic | -0.709 | Destabilizing | 0.676 | D | 0.363 | neutral | None | None | None | None | I |
V/Y | 0.3172 | likely_benign | 0.3249 | benign | -0.422 | Destabilizing | 0.002 | N | 0.203 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.