Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9069 | 27430;27431;27432 | chr2:178712820;178712819;178712818 | chr2:179577547;179577546;179577545 |
N2AB | 8752 | 26479;26480;26481 | chr2:178712820;178712819;178712818 | chr2:179577547;179577546;179577545 |
N2A | 7825 | 23698;23699;23700 | chr2:178712820;178712819;178712818 | chr2:179577547;179577546;179577545 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.061 | N | 0.271 | 0.087 | 0.253726318573 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2883 | likely_benign | 0.3463 | ambiguous | -1.197 | Destabilizing | 0.863 | D | 0.557 | neutral | None | None | None | None | N |
L/C | 0.5109 | ambiguous | 0.5575 | ambiguous | -0.859 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
L/D | 0.778 | likely_pathogenic | 0.8284 | pathogenic | -0.311 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/E | 0.4149 | ambiguous | 0.4978 | ambiguous | -0.34 | Destabilizing | 0.997 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/F | 0.1035 | likely_benign | 0.0967 | benign | -0.894 | Destabilizing | 0.077 | N | 0.274 | neutral | N | 0.492268927 | None | None | N |
L/G | 0.592 | likely_pathogenic | 0.6779 | pathogenic | -1.464 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/H | 0.2454 | likely_benign | 0.2917 | benign | -0.783 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/I | 0.1029 | likely_benign | 0.1066 | benign | -0.569 | Destabilizing | 0.17 | N | 0.243 | neutral | None | None | None | None | N |
L/K | 0.2897 | likely_benign | 0.3741 | ambiguous | -0.717 | Destabilizing | 0.997 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/M | 0.1064 | likely_benign | 0.1092 | benign | -0.518 | Destabilizing | 0.988 | D | 0.631 | neutral | N | 0.511051967 | None | None | N |
L/N | 0.5319 | ambiguous | 0.5896 | pathogenic | -0.521 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/P | 0.6336 | likely_pathogenic | 0.7418 | pathogenic | -0.745 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/Q | 0.1863 | likely_benign | 0.2363 | benign | -0.689 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/R | 0.1984 | likely_benign | 0.2679 | benign | -0.239 | Destabilizing | 0.997 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/S | 0.3216 | likely_benign | 0.3836 | ambiguous | -1.127 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | N | 0.520839608 | None | None | N |
L/T | 0.2427 | likely_benign | 0.2802 | benign | -1.04 | Destabilizing | 0.939 | D | 0.615 | neutral | None | None | None | None | N |
L/V | 0.0981 | likely_benign | 0.1024 | benign | -0.745 | Destabilizing | 0.061 | N | 0.271 | neutral | N | 0.509025104 | None | None | N |
L/W | 0.1712 | likely_benign | 0.199 | benign | -0.933 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | D | 0.522661762 | None | None | N |
L/Y | 0.3387 | likely_benign | 0.3545 | ambiguous | -0.683 | Destabilizing | 0.964 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.