Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9070 | 27433;27434;27435 | chr2:178712817;178712816;178712815 | chr2:179577544;179577543;179577542 |
N2AB | 8753 | 26482;26483;26484 | chr2:178712817;178712816;178712815 | chr2:179577544;179577543;179577542 |
N2A | 7826 | 23701;23702;23703 | chr2:178712817;178712816;178712815 | chr2:179577544;179577543;179577542 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1226337905 | None | None | N | 0.093 | 0.099 | 0.143124449307 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1226337905 | None | None | N | 0.093 | 0.099 | 0.143124449307 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47003E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1405 | likely_benign | 0.1355 | benign | -0.16 | Destabilizing | None | N | 0.094 | neutral | N | 0.491279098 | None | None | N |
E/C | 0.7366 | likely_pathogenic | 0.7556 | pathogenic | -0.05 | Destabilizing | 0.356 | N | 0.283 | neutral | None | None | None | None | N |
E/D | 0.1265 | likely_benign | 0.1245 | benign | -0.236 | Destabilizing | None | N | 0.093 | neutral | N | 0.478937058 | None | None | N |
E/F | 0.5828 | likely_pathogenic | 0.6027 | pathogenic | -0.1 | Destabilizing | 0.356 | N | 0.343 | neutral | None | None | None | None | N |
E/G | 0.1225 | likely_benign | 0.1234 | benign | -0.313 | Destabilizing | 0.012 | N | 0.24 | neutral | D | 0.533464976 | None | None | N |
E/H | 0.2868 | likely_benign | 0.2748 | benign | 0.329 | Stabilizing | 0.214 | N | 0.214 | neutral | None | None | None | None | N |
E/I | 0.2959 | likely_benign | 0.308 | benign | 0.194 | Stabilizing | 0.038 | N | 0.365 | neutral | None | None | None | None | N |
E/K | 0.0872 | likely_benign | 0.0873 | benign | 0.5 | Stabilizing | None | N | 0.099 | neutral | N | 0.486863108 | None | None | N |
E/L | 0.2839 | likely_benign | 0.2864 | benign | 0.194 | Stabilizing | 0.016 | N | 0.256 | neutral | None | None | None | None | N |
E/M | 0.3502 | ambiguous | 0.3717 | ambiguous | 0.117 | Stabilizing | 0.356 | N | 0.294 | neutral | None | None | None | None | N |
E/N | 0.2138 | likely_benign | 0.205 | benign | 0.172 | Stabilizing | 0.038 | N | 0.143 | neutral | None | None | None | None | N |
E/P | 0.6858 | likely_pathogenic | 0.685 | pathogenic | 0.096 | Stabilizing | 0.136 | N | 0.309 | neutral | None | None | None | None | N |
E/Q | 0.0984 | likely_benign | 0.092 | benign | 0.203 | Stabilizing | None | N | 0.093 | neutral | N | 0.521285112 | None | None | N |
E/R | 0.1394 | likely_benign | 0.1391 | benign | 0.694 | Stabilizing | 0.016 | N | 0.148 | neutral | None | None | None | None | N |
E/S | 0.1606 | likely_benign | 0.1545 | benign | 0.042 | Stabilizing | 0.016 | N | 0.154 | neutral | None | None | None | None | N |
E/T | 0.1724 | likely_benign | 0.1738 | benign | 0.175 | Stabilizing | None | N | 0.09 | neutral | None | None | None | None | N |
E/V | 0.1795 | likely_benign | 0.1829 | benign | 0.096 | Stabilizing | None | N | 0.161 | neutral | N | 0.521458471 | None | None | N |
E/W | 0.6952 | likely_pathogenic | 0.7225 | pathogenic | 0.004 | Stabilizing | 0.864 | D | 0.289 | neutral | None | None | None | None | N |
E/Y | 0.4492 | ambiguous | 0.4569 | ambiguous | 0.139 | Stabilizing | 0.356 | N | 0.346 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.