Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9071 | 27436;27437;27438 | chr2:178712814;178712813;178712812 | chr2:179577541;179577540;179577539 |
N2AB | 8754 | 26485;26486;26487 | chr2:178712814;178712813;178712812 | chr2:179577541;179577540;179577539 |
N2A | 7827 | 23704;23705;23706 | chr2:178712814;178712813;178712812 | chr2:179577541;179577540;179577539 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.002 | N | 0.123 | 0.146 | 0.134241683229 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85829E-06 | 0 | 0 |
D/V | rs886044486 | 0.227 | 0.117 | N | 0.34 | 0.189 | 0.36453787251 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.7E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/V | rs886044486 | 0.227 | 0.117 | N | 0.34 | 0.189 | 0.36453787251 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/V | rs886044486 | 0.227 | 0.117 | N | 0.34 | 0.189 | 0.36453787251 | gnomAD-4.0.0 | 5.12447E-06 | None | None | None | None | N | None | 0 | 6.78127E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1409 | likely_benign | 0.1445 | benign | 0.07 | Stabilizing | 0.027 | N | 0.295 | neutral | N | 0.45621232 | None | None | N |
D/C | 0.5504 | ambiguous | 0.5716 | pathogenic | -0.176 | Destabilizing | 0.935 | D | 0.325 | neutral | None | None | None | None | N |
D/E | 0.1439 | likely_benign | 0.1244 | benign | -0.438 | Destabilizing | None | N | 0.089 | neutral | N | 0.476949105 | None | None | N |
D/F | 0.4343 | ambiguous | 0.4679 | ambiguous | -0.086 | Destabilizing | 0.791 | D | 0.317 | neutral | None | None | None | None | N |
D/G | 0.091 | likely_benign | 0.0907 | benign | -0.012 | Destabilizing | None | N | 0.091 | neutral | N | 0.4357717 | None | None | N |
D/H | 0.2163 | likely_benign | 0.232 | benign | 0.546 | Stabilizing | 0.484 | N | 0.313 | neutral | N | 0.505349215 | None | None | N |
D/I | 0.3189 | likely_benign | 0.3375 | benign | 0.216 | Stabilizing | 0.38 | N | 0.353 | neutral | None | None | None | None | N |
D/K | 0.2316 | likely_benign | 0.2463 | benign | 0.401 | Stabilizing | 0.081 | N | 0.302 | neutral | None | None | None | None | N |
D/L | 0.3165 | likely_benign | 0.3302 | benign | 0.216 | Stabilizing | 0.149 | N | 0.34 | neutral | None | None | None | None | N |
D/M | 0.4987 | ambiguous | 0.495 | ambiguous | -0.003 | Destabilizing | 0.935 | D | 0.313 | neutral | None | None | None | None | N |
D/N | 0.08 | likely_benign | 0.0787 | benign | 0.193 | Stabilizing | 0.002 | N | 0.123 | neutral | N | 0.447127631 | None | None | N |
D/P | 0.5397 | ambiguous | 0.5407 | ambiguous | 0.185 | Stabilizing | 0.555 | D | 0.355 | neutral | None | None | None | None | N |
D/Q | 0.2596 | likely_benign | 0.2559 | benign | 0.178 | Stabilizing | 0.235 | N | 0.277 | neutral | None | None | None | None | N |
D/R | 0.2664 | likely_benign | 0.2964 | benign | 0.593 | Stabilizing | 0.235 | N | 0.337 | neutral | None | None | None | None | N |
D/S | 0.1083 | likely_benign | 0.1083 | benign | 0.113 | Stabilizing | 0.035 | N | 0.221 | neutral | None | None | None | None | N |
D/T | 0.2109 | likely_benign | 0.2115 | benign | 0.185 | Stabilizing | 0.002 | N | 0.167 | neutral | None | None | None | None | N |
D/V | 0.1904 | likely_benign | 0.2031 | benign | 0.185 | Stabilizing | 0.117 | N | 0.34 | neutral | N | 0.469000657 | None | None | N |
D/W | 0.7341 | likely_pathogenic | 0.7679 | pathogenic | -0.082 | Destabilizing | 0.935 | D | 0.408 | neutral | None | None | None | None | N |
D/Y | 0.1403 | likely_benign | 0.1637 | benign | 0.126 | Stabilizing | 0.741 | D | 0.317 | neutral | N | 0.485129902 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.