Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9076 | 27451;27452;27453 | chr2:178712799;178712798;178712797 | chr2:179577526;179577525;179577524 |
N2AB | 8759 | 26500;26501;26502 | chr2:178712799;178712798;178712797 | chr2:179577526;179577525;179577524 |
N2A | 7832 | 23719;23720;23721 | chr2:178712799;178712798;178712797 | chr2:179577526;179577525;179577524 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.981 | D | 0.685 | 0.566 | 0.632033471028 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79896E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8595 | likely_pathogenic | 0.8985 | pathogenic | -2.466 | Highly Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
L/C | 0.9056 | likely_pathogenic | 0.9272 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9996 | pathogenic | -3.33 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/E | 0.9899 | likely_pathogenic | 0.9953 | pathogenic | -3.007 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/F | 0.6659 | likely_pathogenic | 0.722 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/G | 0.9677 | likely_pathogenic | 0.9836 | pathogenic | -3.074 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/H | 0.9858 | likely_pathogenic | 0.9944 | pathogenic | -2.906 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/I | 0.3091 | likely_benign | 0.2955 | benign | -0.636 | Destabilizing | 0.91 | D | 0.381 | neutral | None | None | None | None | N |
L/K | 0.9835 | likely_pathogenic | 0.9932 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.2562 | likely_benign | 0.2702 | benign | -0.899 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.544424364 | None | None | N |
L/N | 0.9933 | likely_pathogenic | 0.9969 | pathogenic | -2.603 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/P | 0.9959 | likely_pathogenic | 0.9983 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.565695398 | None | None | N |
L/Q | 0.9687 | likely_pathogenic | 0.9853 | pathogenic | -2.237 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | D | 0.583799653 | None | None | N |
L/R | 0.9683 | likely_pathogenic | 0.986 | pathogenic | -2.029 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.583799653 | None | None | N |
L/S | 0.9871 | likely_pathogenic | 0.9937 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/T | 0.945 | likely_pathogenic | 0.9639 | pathogenic | -2.639 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/V | 0.3389 | likely_benign | 0.3247 | benign | -1.237 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | D | 0.534460411 | None | None | N |
L/W | 0.9269 | likely_pathogenic | 0.9673 | pathogenic | -1.929 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/Y | 0.9497 | likely_pathogenic | 0.9748 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.