Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9080 | 27463;27464;27465 | chr2:178712787;178712786;178712785 | chr2:179577514;179577513;179577512 |
N2AB | 8763 | 26512;26513;26514 | chr2:178712787;178712786;178712785 | chr2:179577514;179577513;179577512 |
N2A | 7836 | 23731;23732;23733 | chr2:178712787;178712786;178712785 | chr2:179577514;179577513;179577512 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1418163017 | None | None | N | 0.144 | 0.049 | 0.0716867268079 | gnomAD-4.0.0 | 6.84218E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99467E-07 | 0 | 0 |
D/N | rs1405635875 | -0.376 | None | N | 0.101 | 0.109 | 0.104622674875 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/N | rs1405635875 | -0.376 | None | N | 0.101 | 0.109 | 0.104622674875 | gnomAD-4.0.0 | 4.10535E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49738E-06 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1109 | likely_benign | 0.1176 | benign | -0.43 | Destabilizing | 0.012 | N | 0.241 | neutral | N | 0.468543053 | None | None | N |
D/C | 0.4395 | ambiguous | 0.4479 | ambiguous | 0.173 | Stabilizing | 0.864 | D | 0.359 | neutral | None | None | None | None | N |
D/E | 0.1238 | likely_benign | 0.1215 | benign | -0.345 | Destabilizing | None | N | 0.144 | neutral | N | 0.4399323 | None | None | N |
D/F | 0.4031 | ambiguous | 0.4383 | ambiguous | -0.625 | Destabilizing | 0.001 | N | 0.19 | neutral | None | None | None | None | N |
D/G | 0.1122 | likely_benign | 0.1193 | benign | -0.621 | Destabilizing | None | N | 0.154 | neutral | N | 0.477181179 | None | None | N |
D/H | 0.1443 | likely_benign | 0.1597 | benign | -0.771 | Destabilizing | 0.344 | N | 0.333 | neutral | N | 0.50381042 | None | None | N |
D/I | 0.3049 | likely_benign | 0.3421 | ambiguous | 0.027 | Stabilizing | 0.214 | N | 0.461 | neutral | None | None | None | None | N |
D/K | 0.2014 | likely_benign | 0.2253 | benign | 0.221 | Stabilizing | 0.001 | N | 0.197 | neutral | None | None | None | None | N |
D/L | 0.2491 | likely_benign | 0.2832 | benign | 0.027 | Stabilizing | 0.038 | N | 0.359 | neutral | None | None | None | None | N |
D/M | 0.452 | ambiguous | 0.4722 | ambiguous | 0.45 | Stabilizing | 0.628 | D | 0.371 | neutral | None | None | None | None | N |
D/N | 0.0751 | likely_benign | 0.0778 | benign | 0.034 | Stabilizing | None | N | 0.101 | neutral | N | 0.387788539 | None | None | N |
D/P | 0.6538 | likely_pathogenic | 0.7005 | pathogenic | -0.104 | Destabilizing | 0.136 | N | 0.403 | neutral | None | None | None | None | N |
D/Q | 0.1909 | likely_benign | 0.1935 | benign | 0.042 | Stabilizing | 0.038 | N | 0.229 | neutral | None | None | None | None | N |
D/R | 0.1918 | likely_benign | 0.2141 | benign | 0.183 | Stabilizing | None | N | 0.153 | neutral | None | None | None | None | N |
D/S | 0.0869 | likely_benign | 0.0892 | benign | -0.099 | Destabilizing | 0.003 | N | 0.167 | neutral | None | None | None | None | N |
D/T | 0.1972 | likely_benign | 0.2122 | benign | 0.049 | Stabilizing | 0.031 | N | 0.268 | neutral | None | None | None | None | N |
D/V | 0.1843 | likely_benign | 0.2118 | benign | -0.104 | Destabilizing | 0.055 | N | 0.408 | neutral | N | 0.461113845 | None | None | N |
D/W | 0.7206 | likely_pathogenic | 0.7505 | pathogenic | -0.554 | Destabilizing | 0.676 | D | 0.36 | neutral | None | None | None | None | N |
D/Y | 0.1413 | likely_benign | 0.1682 | benign | -0.412 | Destabilizing | 0.002 | N | 0.178 | neutral | N | 0.466291632 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.