Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9084 | 27475;27476;27477 | chr2:178712775;178712774;178712773 | chr2:179577502;179577501;179577500 |
N2AB | 8767 | 26524;26525;26526 | chr2:178712775;178712774;178712773 | chr2:179577502;179577501;179577500 |
N2A | 7840 | 23743;23744;23745 | chr2:178712775;178712774;178712773 | chr2:179577502;179577501;179577500 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs761372985 | 0.054 | None | N | 0.095 | 0.077 | 0.0762999501168 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
S/T | rs761372985 | 0.054 | None | N | 0.095 | 0.077 | 0.0762999501168 | gnomAD-4.0.0 | 3.42109E-06 | None | None | None | None | N | None | 0 | 6.71021E-05 | None | 0 | 0 | None | 0 | 0 | 8.99465E-07 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0731 | likely_benign | 0.072 | benign | -0.255 | Destabilizing | 0.005 | N | 0.226 | neutral | N | 0.508677522 | None | None | N |
S/C | 0.151 | likely_benign | 0.1529 | benign | -0.211 | Destabilizing | 0.676 | D | 0.331 | neutral | None | None | None | None | N |
S/D | 0.2073 | likely_benign | 0.2184 | benign | 0.116 | Stabilizing | 0.072 | N | 0.183 | neutral | None | None | None | None | N |
S/E | 0.2639 | likely_benign | 0.2762 | benign | 0.003 | Stabilizing | 0.072 | N | 0.189 | neutral | None | None | None | None | N |
S/F | 0.123 | likely_benign | 0.1209 | benign | -1.011 | Destabilizing | 0.12 | N | 0.399 | neutral | None | None | None | None | N |
S/G | 0.0951 | likely_benign | 0.0916 | benign | -0.297 | Destabilizing | 0.031 | N | 0.174 | neutral | None | None | None | None | N |
S/H | 0.2132 | likely_benign | 0.2188 | benign | -0.719 | Destabilizing | 0.628 | D | 0.332 | neutral | None | None | None | None | N |
S/I | 0.1222 | likely_benign | 0.1253 | benign | -0.274 | Destabilizing | 0.016 | N | 0.301 | neutral | None | None | None | None | N |
S/K | 0.3323 | likely_benign | 0.3446 | ambiguous | -0.293 | Destabilizing | 0.072 | N | 0.186 | neutral | None | None | None | None | N |
S/L | 0.0809 | likely_benign | 0.0779 | benign | -0.274 | Destabilizing | None | N | 0.159 | neutral | N | 0.496596446 | None | None | N |
S/M | 0.1558 | likely_benign | 0.1367 | benign | -0.046 | Destabilizing | 0.214 | N | 0.343 | neutral | None | None | None | None | N |
S/N | 0.1133 | likely_benign | 0.114 | benign | -0.02 | Destabilizing | 0.072 | N | 0.295 | neutral | None | None | None | None | N |
S/P | 0.2158 | likely_benign | 0.2323 | benign | -0.244 | Destabilizing | None | N | 0.214 | neutral | N | 0.517339168 | None | None | N |
S/Q | 0.2846 | likely_benign | 0.2889 | benign | -0.274 | Destabilizing | 0.356 | N | 0.309 | neutral | None | None | None | None | N |
S/R | 0.2768 | likely_benign | 0.293 | benign | -0.078 | Destabilizing | 0.214 | N | 0.391 | neutral | None | None | None | None | N |
S/T | 0.0779 | likely_benign | 0.0745 | benign | -0.152 | Destabilizing | None | N | 0.095 | neutral | N | 0.503367703 | None | None | N |
S/V | 0.1328 | likely_benign | 0.1298 | benign | -0.244 | Destabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
S/W | 0.1972 | likely_benign | 0.2099 | benign | -1.065 | Destabilizing | 0.864 | D | 0.381 | neutral | None | None | None | None | N |
S/Y | 0.1253 | likely_benign | 0.128 | benign | -0.758 | Destabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.