Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9087 | 27484;27485;27486 | chr2:178712766;178712765;178712764 | chr2:179577493;179577492;179577491 |
N2AB | 8770 | 26533;26534;26535 | chr2:178712766;178712765;178712764 | chr2:179577493;179577492;179577491 |
N2A | 7843 | 23752;23753;23754 | chr2:178712766;178712765;178712764 | chr2:179577493;179577492;179577491 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1444251270 | -0.742 | 1.0 | D | 0.888 | 0.816 | 0.86052713887 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/E | rs1444251270 | -0.742 | 1.0 | D | 0.888 | 0.816 | 0.86052713887 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
G/R | None | None | 1.0 | D | 0.879 | 0.823 | 0.896446140896 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3389 | likely_benign | 0.3568 | ambiguous | -0.475 | Destabilizing | 0.998 | D | 0.785 | deleterious | D | 0.581434506 | None | None | N |
G/C | 0.6853 | likely_pathogenic | 0.7722 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/D | 0.5243 | ambiguous | 0.6652 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/E | 0.635 | likely_pathogenic | 0.7898 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.661570595 | None | None | N |
G/F | 0.9488 | likely_pathogenic | 0.9735 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/H | 0.8694 | likely_pathogenic | 0.928 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
G/I | 0.9242 | likely_pathogenic | 0.9618 | pathogenic | 0.373 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/K | 0.8376 | likely_pathogenic | 0.9226 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
G/L | 0.8788 | likely_pathogenic | 0.926 | pathogenic | 0.373 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/M | 0.8995 | likely_pathogenic | 0.9372 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
G/N | 0.7307 | likely_pathogenic | 0.8182 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
G/P | 0.9885 | likely_pathogenic | 0.9938 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
G/Q | 0.7218 | likely_pathogenic | 0.8237 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
G/R | 0.6563 | likely_pathogenic | 0.7978 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.661368791 | None | None | N |
G/S | 0.2182 | likely_benign | 0.2637 | benign | -1.068 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/T | 0.669 | likely_pathogenic | 0.7702 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
G/V | 0.8286 | likely_pathogenic | 0.8996 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.853 | deleterious | D | 0.661570595 | None | None | N |
G/W | 0.872 | likely_pathogenic | 0.931 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/Y | 0.9218 | likely_pathogenic | 0.9606 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.