Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9089 | 27490;27491;27492 | chr2:178712760;178712759;178712758 | chr2:179577487;179577486;179577485 |
N2AB | 8772 | 26539;26540;26541 | chr2:178712760;178712759;178712758 | chr2:179577487;179577486;179577485 |
N2A | 7845 | 23758;23759;23760 | chr2:178712760;178712759;178712758 | chr2:179577487;179577486;179577485 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs794729633 | -2.299 | 1.0 | D | 0.793 | 0.807 | 0.756873525501 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/H | rs794729633 | -2.299 | 1.0 | D | 0.793 | 0.807 | 0.756873525501 | gnomAD-4.0.0 | 1.16316E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52909E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9912 | likely_pathogenic | 0.9933 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/C | 0.9373 | likely_pathogenic | 0.9474 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.666424616 | None | None | N |
Y/D | 0.9927 | likely_pathogenic | 0.9963 | pathogenic | -2.605 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.666424616 | None | None | N |
Y/E | 0.9967 | likely_pathogenic | 0.9981 | pathogenic | -2.35 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/F | 0.2091 | likely_benign | 0.2087 | benign | -0.604 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | D | 0.604538454 | None | None | N |
Y/G | 0.9847 | likely_pathogenic | 0.9891 | pathogenic | -2.456 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/H | 0.9655 | likely_pathogenic | 0.9786 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.666222812 | None | None | N |
Y/I | 0.8365 | likely_pathogenic | 0.8141 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/K | 0.9964 | likely_pathogenic | 0.9981 | pathogenic | -1.668 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/L | 0.8256 | likely_pathogenic | 0.8287 | pathogenic | -0.494 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
Y/M | 0.9306 | likely_pathogenic | 0.9356 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/N | 0.9509 | likely_pathogenic | 0.9707 | pathogenic | -2.573 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.666424616 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/Q | 0.9966 | likely_pathogenic | 0.998 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/R | 0.9924 | likely_pathogenic | 0.9954 | pathogenic | -2.079 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/S | 0.9854 | likely_pathogenic | 0.9905 | pathogenic | -2.888 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.666424616 | None | None | N |
Y/T | 0.9907 | likely_pathogenic | 0.9929 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.8182 | likely_pathogenic | 0.7817 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/W | 0.8416 | likely_pathogenic | 0.8574 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.