Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9091 | 27496;27497;27498 | chr2:178712754;178712753;178712752 | chr2:179577481;179577480;179577479 |
N2AB | 8774 | 26545;26546;26547 | chr2:178712754;178712753;178712752 | chr2:179577481;179577480;179577479 |
N2A | 7847 | 23764;23765;23766 | chr2:178712754;178712753;178712752 | chr2:179577481;179577480;179577479 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | rs375546576 | -1.542 | 1.0 | D | 0.884 | 0.566 | 0.797395815551 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66389E-04 |
C/W | rs375546576 | -1.542 | 1.0 | D | 0.884 | 0.566 | 0.797395815551 | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8075 | likely_pathogenic | 0.8856 | pathogenic | -1.396 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
C/D | 0.9985 | likely_pathogenic | 0.9995 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/E | 0.999 | likely_pathogenic | 0.9997 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
C/F | 0.7121 | likely_pathogenic | 0.8482 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.566802628 | None | None | N |
C/G | 0.6848 | likely_pathogenic | 0.8281 | pathogenic | -1.76 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.568323565 | None | None | N |
C/H | 0.9932 | likely_pathogenic | 0.9977 | pathogenic | -1.988 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
C/I | 0.8058 | likely_pathogenic | 0.8793 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
C/K | 0.9992 | likely_pathogenic | 0.9997 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
C/L | 0.6943 | likely_pathogenic | 0.7899 | pathogenic | -0.41 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
C/M | 0.8934 | likely_pathogenic | 0.9371 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
C/N | 0.9901 | likely_pathogenic | 0.9961 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
C/P | 0.998 | likely_pathogenic | 0.9992 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
C/Q | 0.996 | likely_pathogenic | 0.9986 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
C/R | 0.9887 | likely_pathogenic | 0.996 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.568323565 | None | None | N |
C/S | 0.8833 | likely_pathogenic | 0.947 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.568323565 | None | None | N |
C/T | 0.9353 | likely_pathogenic | 0.9649 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
C/V | 0.6778 | likely_pathogenic | 0.7475 | pathogenic | -0.716 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
C/W | 0.9741 | likely_pathogenic | 0.9912 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.568323565 | None | None | N |
C/Y | 0.9318 | likely_pathogenic | 0.9754 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.568323565 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.