Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9095 | 27508;27509;27510 | chr2:178712742;178712741;178712740 | chr2:179577469;179577468;179577467 |
N2AB | 8778 | 26557;26558;26559 | chr2:178712742;178712741;178712740 | chr2:179577469;179577468;179577467 |
N2A | 7851 | 23776;23777;23778 | chr2:178712742;178712741;178712740 | chr2:179577469;179577468;179577467 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.999 | D | 0.614 | 0.56 | 0.287603790349 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/S | rs1319823465 | -1.028 | 0.999 | N | 0.577 | 0.51 | 0.215109475489 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9577 | likely_pathogenic | 0.9568 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
N/C | 0.9124 | likely_pathogenic | 0.8899 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/D | 0.8665 | likely_pathogenic | 0.8954 | pathogenic | -1.149 | Destabilizing | 0.999 | D | 0.614 | neutral | D | 0.535306789 | None | None | N |
N/E | 0.9902 | likely_pathogenic | 0.9904 | pathogenic | -1.033 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/F | 0.9983 | likely_pathogenic | 0.9984 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
N/G | 0.8815 | likely_pathogenic | 0.8837 | pathogenic | -1.325 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
N/H | 0.8924 | likely_pathogenic | 0.8965 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.547930542 | None | None | N |
N/I | 0.9828 | likely_pathogenic | 0.9833 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.559704921 | None | None | N |
N/K | 0.9917 | likely_pathogenic | 0.9927 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.558944453 | None | None | N |
N/L | 0.9589 | likely_pathogenic | 0.9572 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
N/M | 0.979 | likely_pathogenic | 0.9779 | pathogenic | 0.366 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/P | 0.9874 | likely_pathogenic | 0.9865 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/Q | 0.9883 | likely_pathogenic | 0.989 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/R | 0.9874 | likely_pathogenic | 0.9877 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/S | 0.2821 | likely_benign | 0.2866 | benign | -1.019 | Destabilizing | 0.999 | D | 0.577 | neutral | N | 0.501046836 | None | None | N |
N/T | 0.7656 | likely_pathogenic | 0.7623 | pathogenic | -0.719 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | D | 0.535560279 | None | None | N |
N/V | 0.9649 | likely_pathogenic | 0.963 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/W | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
N/Y | 0.9803 | likely_pathogenic | 0.9812 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.559451432 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.