Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9096 | 27511;27512;27513 | chr2:178712739;178712738;178712737 | chr2:179577466;179577465;179577464 |
N2AB | 8779 | 26560;26561;26562 | chr2:178712739;178712738;178712737 | chr2:179577466;179577465;179577464 |
N2A | 7852 | 23779;23780;23781 | chr2:178712739;178712738;178712737 | chr2:179577466;179577465;179577464 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs775382008 | -0.03 | 0.001 | N | 0.137 | 0.097 | 0.151104730317 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs775382008 | -0.03 | 0.001 | N | 0.137 | 0.097 | 0.151104730317 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.13 | likely_benign | 0.1367 | benign | 0.019 | Stabilizing | 0.016 | N | 0.209 | neutral | N | 0.465701189 | None | None | I |
E/C | 0.8369 | likely_pathogenic | 0.8526 | pathogenic | -0.097 | Destabilizing | 0.992 | D | 0.355 | neutral | None | None | None | None | I |
E/D | 0.0853 | likely_benign | 0.0841 | benign | -0.323 | Destabilizing | 0.001 | N | 0.137 | neutral | N | 0.422046412 | None | None | I |
E/F | 0.6476 | likely_pathogenic | 0.6669 | pathogenic | -0.109 | Destabilizing | 0.972 | D | 0.36 | neutral | None | None | None | None | I |
E/G | 0.1544 | likely_benign | 0.1589 | benign | -0.071 | Destabilizing | 0.334 | N | 0.359 | neutral | N | 0.494773302 | None | None | I |
E/H | 0.3579 | ambiguous | 0.4029 | ambiguous | 0.455 | Stabilizing | 0.972 | D | 0.298 | neutral | None | None | None | None | I |
E/I | 0.2718 | likely_benign | 0.2952 | benign | 0.195 | Stabilizing | 0.92 | D | 0.389 | neutral | None | None | None | None | I |
E/K | 0.1162 | likely_benign | 0.1343 | benign | 0.435 | Stabilizing | 0.549 | D | 0.325 | neutral | N | 0.489346052 | None | None | I |
E/L | 0.3278 | likely_benign | 0.3517 | ambiguous | 0.195 | Stabilizing | 0.617 | D | 0.372 | neutral | None | None | None | None | I |
E/M | 0.3924 | ambiguous | 0.4267 | ambiguous | 0.03 | Stabilizing | 0.992 | D | 0.371 | neutral | None | None | None | None | I |
E/N | 0.1952 | likely_benign | 0.2166 | benign | 0.287 | Stabilizing | 0.447 | N | 0.297 | neutral | None | None | None | None | I |
E/P | 0.4759 | ambiguous | 0.4542 | ambiguous | 0.153 | Stabilizing | 0.92 | D | 0.37 | neutral | None | None | None | None | I |
E/Q | 0.1416 | likely_benign | 0.1576 | benign | 0.278 | Stabilizing | 0.549 | D | 0.315 | neutral | N | 0.497293532 | None | None | I |
E/R | 0.2077 | likely_benign | 0.2375 | benign | 0.592 | Stabilizing | 0.92 | D | 0.287 | neutral | None | None | None | None | I |
E/S | 0.1697 | likely_benign | 0.1818 | benign | 0.142 | Stabilizing | 0.059 | N | 0.237 | neutral | None | None | None | None | I |
E/T | 0.1904 | likely_benign | 0.2087 | benign | 0.223 | Stabilizing | 0.447 | N | 0.4 | neutral | None | None | None | None | I |
E/V | 0.1661 | likely_benign | 0.1783 | benign | 0.153 | Stabilizing | 0.549 | D | 0.401 | neutral | N | 0.501757989 | None | None | I |
E/W | 0.8305 | likely_pathogenic | 0.848 | pathogenic | -0.099 | Destabilizing | 0.992 | D | 0.468 | neutral | None | None | None | None | I |
E/Y | 0.5042 | ambiguous | 0.5267 | ambiguous | 0.105 | Stabilizing | 0.972 | D | 0.381 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.