Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9099 | 27520;27521;27522 | chr2:178712730;178712729;178712728 | chr2:179577457;179577456;179577455 |
N2AB | 8782 | 26569;26570;26571 | chr2:178712730;178712729;178712728 | chr2:179577457;179577456;179577455 |
N2A | 7855 | 23788;23789;23790 | chr2:178712730;178712729;178712728 | chr2:179577457;179577456;179577455 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.22 | D | 0.602 | 0.156 | 0.144782658237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3134 | likely_benign | 0.3063 | benign | -0.252 | Destabilizing | 0.072 | N | 0.625 | neutral | None | None | None | None | N |
K/C | 0.7376 | likely_pathogenic | 0.717 | pathogenic | -0.343 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/D | 0.5072 | ambiguous | 0.5183 | ambiguous | 0.178 | Stabilizing | 0.567 | D | 0.651 | neutral | None | None | None | None | N |
K/E | 0.1269 | likely_benign | 0.1377 | benign | 0.205 | Stabilizing | 0.124 | N | 0.588 | neutral | N | 0.495309233 | None | None | N |
K/F | 0.6725 | likely_pathogenic | 0.6526 | pathogenic | -0.36 | Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/G | 0.4419 | ambiguous | 0.4251 | ambiguous | -0.502 | Destabilizing | 0.272 | N | 0.665 | neutral | None | None | None | None | N |
K/H | 0.2827 | likely_benign | 0.2637 | benign | -0.876 | Destabilizing | 0.909 | D | 0.668 | neutral | None | None | None | None | N |
K/I | 0.2874 | likely_benign | 0.2793 | benign | 0.339 | Stabilizing | 0.567 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/L | 0.3261 | likely_benign | 0.309 | benign | 0.339 | Stabilizing | 0.272 | N | 0.678 | prob.neutral | None | None | None | None | N |
K/M | 0.18 | likely_benign | 0.1793 | benign | 0.291 | Stabilizing | 0.958 | D | 0.671 | neutral | N | 0.493346694 | None | None | N |
K/N | 0.3359 | likely_benign | 0.3413 | ambiguous | 0.076 | Stabilizing | 0.22 | N | 0.602 | neutral | D | 0.523653414 | None | None | N |
K/P | 0.8617 | likely_pathogenic | 0.8543 | pathogenic | 0.172 | Stabilizing | 0.726 | D | 0.671 | neutral | None | None | None | None | N |
K/Q | 0.111 | likely_benign | 0.1091 | benign | -0.141 | Destabilizing | 0.497 | N | 0.629 | neutral | N | 0.492733074 | None | None | N |
K/R | 0.0826 | likely_benign | 0.0783 | benign | -0.195 | Destabilizing | 0.002 | N | 0.249 | neutral | D | 0.528963233 | None | None | N |
K/S | 0.3064 | likely_benign | 0.3049 | benign | -0.552 | Destabilizing | 0.014 | N | 0.266 | neutral | None | None | None | None | N |
K/T | 0.1376 | likely_benign | 0.1376 | benign | -0.355 | Destabilizing | 0.004 | N | 0.359 | neutral | N | 0.487308612 | None | None | N |
K/V | 0.2644 | likely_benign | 0.2588 | benign | 0.172 | Stabilizing | 0.567 | D | 0.638 | neutral | None | None | None | None | N |
K/W | 0.7137 | likely_pathogenic | 0.6638 | pathogenic | -0.262 | Destabilizing | 0.968 | D | 0.744 | deleterious | None | None | None | None | N |
K/Y | 0.548 | ambiguous | 0.5183 | ambiguous | 0.073 | Stabilizing | 0.726 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.