Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9100 | 27523;27524;27525 | chr2:178712727;178712726;178712725 | chr2:179577454;179577453;179577452 |
N2AB | 8783 | 26572;26573;26574 | chr2:178712727;178712726;178712725 | chr2:179577454;179577453;179577452 |
N2A | 7856 | 23791;23792;23793 | chr2:178712727;178712726;178712725 | chr2:179577454;179577453;179577452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs746094812 | -0.795 | 0.012 | N | 0.429 | 0.107 | 0.159798565429 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.28923E-04 | None | 0 | 0 | 0 |
A/S | rs746094812 | -0.795 | 0.012 | N | 0.429 | 0.107 | 0.159798565429 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
A/S | rs746094812 | -0.795 | 0.012 | N | 0.429 | 0.107 | 0.159798565429 | gnomAD-4.0.0 | 1.48737E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.63522E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6138 | likely_pathogenic | 0.6135 | pathogenic | -0.664 | Destabilizing | 0.356 | N | 0.578 | neutral | None | None | None | None | N |
A/D | 0.1524 | likely_benign | 0.1569 | benign | -0.239 | Destabilizing | None | N | 0.375 | neutral | N | 0.490423488 | None | None | N |
A/E | 0.209 | likely_benign | 0.1979 | benign | -0.27 | Destabilizing | None | N | 0.286 | neutral | None | None | None | None | N |
A/F | 0.3477 | ambiguous | 0.3121 | benign | -0.619 | Destabilizing | 0.214 | N | 0.67 | neutral | None | None | None | None | N |
A/G | 0.191 | likely_benign | 0.1885 | benign | -0.765 | Destabilizing | 0.024 | N | 0.416 | neutral | N | 0.500117416 | None | None | N |
A/H | 0.5267 | ambiguous | 0.4906 | ambiguous | -0.847 | Destabilizing | 0.628 | D | 0.634 | neutral | None | None | None | None | N |
A/I | 0.1779 | likely_benign | 0.1733 | benign | -0.037 | Destabilizing | None | N | 0.353 | neutral | None | None | None | None | N |
A/K | 0.4964 | ambiguous | 0.4632 | ambiguous | -0.736 | Destabilizing | 0.031 | N | 0.547 | neutral | None | None | None | None | N |
A/L | 0.2049 | likely_benign | 0.1985 | benign | -0.037 | Destabilizing | 0.016 | N | 0.523 | neutral | None | None | None | None | N |
A/M | 0.2128 | likely_benign | 0.204 | benign | -0.164 | Destabilizing | 0.214 | N | 0.613 | neutral | None | None | None | None | N |
A/N | 0.2198 | likely_benign | 0.2178 | benign | -0.503 | Destabilizing | 0.038 | N | 0.613 | neutral | None | None | None | None | N |
A/P | 0.8682 | likely_pathogenic | 0.8662 | pathogenic | -0.157 | Destabilizing | 0.106 | N | 0.636 | neutral | D | 0.528843961 | None | None | N |
A/Q | 0.3801 | ambiguous | 0.3482 | ambiguous | -0.601 | Destabilizing | 0.072 | N | 0.635 | neutral | None | None | None | None | N |
A/R | 0.4679 | ambiguous | 0.4294 | ambiguous | -0.507 | Destabilizing | 0.072 | N | 0.644 | neutral | None | None | None | None | N |
A/S | 0.0984 | likely_benign | 0.0977 | benign | -0.918 | Destabilizing | 0.012 | N | 0.429 | neutral | N | 0.491265872 | None | None | N |
A/T | 0.0798 | likely_benign | 0.082 | benign | -0.841 | Destabilizing | None | N | 0.123 | neutral | N | 0.496559017 | None | None | N |
A/V | 0.0967 | likely_benign | 0.0912 | benign | -0.157 | Destabilizing | None | N | 0.122 | neutral | N | 0.49332772 | None | None | N |
A/W | 0.8012 | likely_pathogenic | 0.7728 | pathogenic | -0.949 | Destabilizing | 0.864 | D | 0.657 | neutral | None | None | None | None | N |
A/Y | 0.4637 | ambiguous | 0.4246 | ambiguous | -0.505 | Destabilizing | 0.356 | N | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.