Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9103 | 27532;27533;27534 | chr2:178712718;178712717;178712716 | chr2:179577445;179577444;179577443 |
N2AB | 8786 | 26581;26582;26583 | chr2:178712718;178712717;178712716 | chr2:179577445;179577444;179577443 |
N2A | 7859 | 23800;23801;23802 | chr2:178712718;178712717;178712716 | chr2:179577445;179577444;179577443 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1351836200 | -0.684 | 0.704 | N | 0.495 | 0.241 | 0.289847578895 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1351836200 | -0.684 | 0.704 | N | 0.495 | 0.241 | 0.289847578895 | gnomAD-4.0.0 | 1.31401E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92678E-04 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0984 | likely_benign | 0.1018 | benign | -0.738 | Destabilizing | 0.704 | D | 0.495 | neutral | N | 0.494531101 | None | None | N |
T/C | 0.6179 | likely_pathogenic | 0.636 | pathogenic | -0.3 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
T/D | 0.4095 | ambiguous | 0.4636 | ambiguous | -0.495 | Destabilizing | 0.939 | D | 0.556 | neutral | None | None | None | None | N |
T/E | 0.2915 | likely_benign | 0.3411 | ambiguous | -0.52 | Destabilizing | 0.884 | D | 0.55 | neutral | None | None | None | None | N |
T/F | 0.3011 | likely_benign | 0.3039 | benign | -0.909 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | N |
T/G | 0.3193 | likely_benign | 0.3143 | benign | -0.973 | Destabilizing | 0.939 | D | 0.625 | neutral | None | None | None | None | N |
T/H | 0.2542 | likely_benign | 0.2628 | benign | -1.32 | Destabilizing | 0.202 | N | 0.515 | neutral | None | None | None | None | N |
T/I | 0.2083 | likely_benign | 0.2334 | benign | -0.206 | Destabilizing | 0.988 | D | 0.593 | neutral | N | 0.504774997 | None | None | N |
T/K | 0.159 | likely_benign | 0.1806 | benign | -0.811 | Destabilizing | 0.852 | D | 0.536 | neutral | N | 0.485323935 | None | None | N |
T/L | 0.141 | likely_benign | 0.1445 | benign | -0.206 | Destabilizing | 0.969 | D | 0.533 | neutral | None | None | None | None | N |
T/M | 0.1095 | likely_benign | 0.1077 | benign | 0.224 | Stabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
T/N | 0.1448 | likely_benign | 0.1596 | benign | -0.65 | Destabilizing | 0.939 | D | 0.541 | neutral | None | None | None | None | N |
T/P | 0.1571 | likely_benign | 0.1646 | benign | -0.352 | Destabilizing | 0.035 | N | 0.334 | neutral | N | 0.514089781 | None | None | N |
T/Q | 0.2002 | likely_benign | 0.2081 | benign | -0.865 | Destabilizing | 0.579 | D | 0.349 | neutral | None | None | None | None | N |
T/R | 0.1347 | likely_benign | 0.1488 | benign | -0.51 | Destabilizing | 0.976 | D | 0.58 | neutral | N | 0.489847066 | None | None | N |
T/S | 0.1121 | likely_benign | 0.1095 | benign | -0.845 | Destabilizing | 0.31 | N | 0.354 | neutral | N | 0.481417215 | None | None | N |
T/V | 0.1651 | likely_benign | 0.1761 | benign | -0.352 | Destabilizing | 0.969 | D | 0.538 | neutral | None | None | None | None | N |
T/W | 0.6839 | likely_pathogenic | 0.6837 | pathogenic | -0.874 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
T/Y | 0.3656 | ambiguous | 0.3859 | ambiguous | -0.651 | Destabilizing | 0.982 | D | 0.658 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.