Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9108 | 27547;27548;27549 | chr2:178712703;178712702;178712701 | chr2:179577430;179577429;179577428 |
N2AB | 8791 | 26596;26597;26598 | chr2:178712703;178712702;178712701 | chr2:179577430;179577429;179577428 |
N2A | 7864 | 23815;23816;23817 | chr2:178712703;178712702;178712701 | chr2:179577430;179577429;179577428 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.002 | N | 0.161 | 0.081 | 0.214338557667 | gnomAD-4.0.0 | 1.59439E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86648E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5336 | ambiguous | 0.4932 | ambiguous | -2.337 | Highly Destabilizing | 0.016 | N | 0.304 | neutral | None | None | None | None | N |
I/C | 0.7711 | likely_pathogenic | 0.7574 | pathogenic | -2.007 | Highly Destabilizing | 0.356 | N | 0.346 | neutral | None | None | None | None | N |
I/D | 0.9678 | likely_pathogenic | 0.9625 | pathogenic | -2.65 | Highly Destabilizing | 0.356 | N | 0.405 | neutral | None | None | None | None | N |
I/E | 0.9349 | likely_pathogenic | 0.9279 | pathogenic | -2.544 | Highly Destabilizing | 0.136 | N | 0.389 | neutral | None | None | None | None | N |
I/F | 0.6304 | likely_pathogenic | 0.6162 | pathogenic | -1.598 | Destabilizing | None | N | 0.164 | neutral | None | None | None | None | N |
I/G | 0.833 | likely_pathogenic | 0.8007 | pathogenic | -2.741 | Highly Destabilizing | 0.136 | N | 0.372 | neutral | None | None | None | None | N |
I/H | 0.9355 | likely_pathogenic | 0.9243 | pathogenic | -1.957 | Destabilizing | 0.864 | D | 0.368 | neutral | None | None | None | None | N |
I/K | 0.9097 | likely_pathogenic | 0.9056 | pathogenic | -1.688 | Destabilizing | 0.106 | N | 0.387 | neutral | N | 0.482131389 | None | None | N |
I/L | 0.2572 | likely_benign | 0.2419 | benign | -1.224 | Destabilizing | 0.002 | N | 0.161 | neutral | N | 0.50390642 | None | None | N |
I/M | 0.2377 | likely_benign | 0.2204 | benign | -1.3 | Destabilizing | 0.171 | N | 0.379 | neutral | N | 0.463773644 | None | None | N |
I/N | 0.7458 | likely_pathogenic | 0.7252 | pathogenic | -1.83 | Destabilizing | 0.628 | D | 0.397 | neutral | None | None | None | None | N |
I/P | 0.8644 | likely_pathogenic | 0.8691 | pathogenic | -1.572 | Destabilizing | 0.356 | N | 0.405 | neutral | None | None | None | None | N |
I/Q | 0.8923 | likely_pathogenic | 0.8758 | pathogenic | -1.931 | Destabilizing | 0.628 | D | 0.386 | neutral | None | None | None | None | N |
I/R | 0.8641 | likely_pathogenic | 0.8533 | pathogenic | -1.184 | Destabilizing | 0.295 | N | 0.397 | neutral | N | 0.482131389 | None | None | N |
I/S | 0.5941 | likely_pathogenic | 0.5636 | ambiguous | -2.476 | Highly Destabilizing | 0.072 | N | 0.362 | neutral | None | None | None | None | N |
I/T | 0.4118 | ambiguous | 0.391 | ambiguous | -2.248 | Highly Destabilizing | 0.029 | N | 0.291 | neutral | N | 0.470014615 | None | None | N |
I/V | 0.0559 | likely_benign | 0.0554 | benign | -1.572 | Destabilizing | None | N | 0.125 | neutral | N | 0.314562137 | None | None | N |
I/W | 0.979 | likely_pathogenic | 0.9773 | pathogenic | -1.785 | Destabilizing | 0.864 | D | 0.379 | neutral | None | None | None | None | N |
I/Y | 0.9169 | likely_pathogenic | 0.9136 | pathogenic | -1.536 | Destabilizing | 0.038 | N | 0.35 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.